Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0520 TCTTCTTCTCCAAACTCCAAACCTAGAATCGAAAAAGCAAAAGGAAGATGGAGTTATAAGATCCTCTACGTCCACCGCACGACCGTAACCTTCCCCACTATGCTTGCCACCCTCTGCAATCCCGCCGCCTCCGCCGACGTCTCCTTCAAGCACCAGCTTCCCGGCGAGGATCTCGACTCCCTTATCTCCGTCACCGACGATGACGACCTCGAAAACATGATGATCGAGTACGATCAACTCCACAGCGCTTCCCCTAAAACTGCTCGTATGCGACTCTTCCTCTTCCCCAACCTCCCTCTTGATTCTTCTGCCGCTTCATCTAACCCGAACCCGACCCGGCCGAAAGGCAGTTACAGCTTCCTCCTCCTTCTTCTTCATTATCTTCCCGTTTGGTTGGTCCGT 402 0.5323 SSSPNSKPRIEKAKGRWSYKILYVHRTTVTFPTMLATLCNPAASADVSFKHQLPGEDLDSLISVTDDDDLENMMIEYDQLHSASPKTARMRLFLFPNLPLDSSAASSNPNPTRPKGSYSFLLLLLHYLPVWLVR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0520 134 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 20 107 - -
Amo19g0520 134 Pfam PB1 domain 23 96 IPR000270 GO:0005515
Amo19g0520 134 SUPERFAMILY CAD & PB1 domains 44 101 - -
Amo19g0520 134 PANTHER OS05G0427100 PROTEIN-RELATED 20 107 - -
Amo19g0520 134 SMART PB1_new 12 97 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0520 Amo-Chr19 7762545 7763004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0520 8 103 MAP Kinase Kinase Kinase AT5G57610 38.384 2.63e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0520 - - ahf:112710162 164.081