Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0517 ATGGCCAACACTGCTGCTGGATCGTCTTCGGTGTCTCCGAAAACATACGATGTATTTCTTTGCTTCCGAGGGGAGGACACGGGGGAGAATTTCACCTGCCATCTTTCTGCCGGTCTCGTTGACGAGGGAATCGAGATATACAAATACGATGATCAGCTTGTAAAAGGTTGTGATATTTGGACACAGATTTCTTTGGCGATCGAGGGTTCACGTGTGTCAGTGGTGGTTTTCTCCCAAGACTTTGCTTCTTCCAAATGGTGCTTAGAGGAACTGGTCAAAATAATGGAGTGCAGAAGAGATATGGGGCAGGTTGTTATACCTGTGTTCTACAACATAGATCCCGCACACGTGCGGTATCAGAAAGAGAGTTACAAGAAATCTTTTGCGAGGCATGAATGGAATCTCTGTAAAAATCAGCAGAAAATTCGTAGGTGGAGAGAGGCTCTCACTGAAGCCGCCAATCTGGCGGGATGGGTCTCCGGAAGTCCTGGGATAAGGGACGACAGTGAACTCATTCGACACATCGTCAAGGATGTCTTGCAAAAGCTGAAACAGAGACGTCCGAATACAACAAAGTACCTTGTTGGAATTGAGAAAACTCAGAAAGATATTGAAATGTTACTCCAAAATGCTAAAATTATTGGAATTTGGGGTCCAGGTGGAATAGGAAAGACGACAATAGGCAAAGTCGTATATAACAAACTCTCTTCCCAGTATGACAGTGTTTGCTTGATGGAAAATATATCCGAGGAAACAAGAAGGTATGGACTACCACGTCTGTGTCGTAACCTTTTCTCGGACCTGCTAAAAGAAGACAATCCAACTCATAATGTTCGGAGACTGCAAACTAAAAAAGCTCTAATTGTGTTTGATGACGTTGATAGTTTCAAGCAATTAGAATACTTATGCGAGGACTCTCAAGTGCTCAGTTACCTAGGAGAAGATAGCAGGGTCATTATTACATCAAGAAACAGGCATTTGCTTGCTAACAAAGCTGATGAGATTTACGAGGTCAAGAACTTGAACCTTACAGAGTCTCTAAAGCTTTTTAGTTTGAAAGCCTTCAGCAAAAGCTATCCTGAAGAGGGATATGAGAAACTCTCTAAGCAAGTGGTTGAATACACAGGAGGAATTCCGTTAGCTCTTAATGTGTTGGGTTCACATCTTTCCTTCAGACTTGATAAAGATTTTTGGGAAAGTACCATGAGGAAACTTGAAAATTCCCCCAATGAAGACATTCAAAAGGTGTTAAGAGTGAGTTATGATGGATTAGATAGTCTACAGCAGAAGATATTTTTAGACATTGCATTCTTTTTCATTGAAGAAGAAGAAGAGCGTGTCAAGAAGATATTACATGCTTCTGGATTCGAACCAAACAATGGACTGCTCGAACTTAAAGATAAAGCTTTAATATCCACTACATCTTATGACAGTAGAATACAAATGCATGGCTTGTTACAAGAGATGGCTTTGGATATAGTTCGTCGAGAATCCGAACTGAATCCTGGAGGCCGCAGCAGATTGAGGGATGTCAAAGACATTCGTGATGTACTTGAAAATAACACAGGAACTAATGCAGTTGAAGGCATAGTTTTGGACTTATCTCAGATAGAAGATTTACAGTTGAGTGCAGATGTATTCGAAAAGATGAATAGGATAAGGTTTCTGAAATTCTATATCCCCAGAAGTAAGAGTTCCAGTGAGAAGTATCTCCCTGAAGGCCTTACGCAATTTCCTAAAGAATTGAGGTACCTTCAGTGGGACGCGTACCCTTTGAAATCTCTTCCGCTGAGATTGTGTTTTAAATTTCTTGTTGAGATTCACATGCGACACAGCAATGTTGAAGAGCTTTGGCAGGGAAAGAAGGATCTTCACAATCTAGAAGTAATTGACCTATGTGAATGCAGAAAGTTGATGAACCTTCCAGATTTGTCTAATGCATCAAGACTTAGAACGGTGAATCTCTCCGGTTGTGAGATGTTGCATTATCTTCATCCAACAGTTCTATCTGCTGGTAAGCTTGCTACTTTGATACTGGATAGGTGCAAAAATCTCATGGAGGTTAAAAGTGAGAAGCGGTTAGAGTCTTTAGAGAAGATCAGTGTCAATGGTTGCTTAAGTCTCAAGGAATTTGAAGTTTGGTCAAGTTTAATTGAAAAATTGGATCTAAGCAAGACAGAAATTGAAACATTGCACACATCCATTGGACATATGGAGAATCTTAGGTCCCTCAATCTAGAAGGTTTAAAACTTAAGCATCTTCCAAATGCGTTGTCCGGCTTGAAATCCCTAAAATATCTTAATCTTTCTCGCAGCGGAGTAGAATTTGACAAACACCAGCTACATGTGTTGTTTAATGGCTTACAGTCACTAGAAAAACTACATGTGACAGATTGTAGTAACTTGTTTGAGCTTCCTGACAACATCAATGTCTTACAGAAATTGCAAGAATTAAGGCTTGATGGGAGCAGCATAGTGACACTGCCAGAAAGCATCAAGCACCTTAGAGTGCTGAAAGTTTTGTCGTTGGAGAATTGCAATAAGCTTGTGAGTGTGCCAGAGCTACCACCATCCATCACGGTGTTCAATGCCAGTAACTGCACTTCATTGGTATCGGTATCAGTATCAACTTTAAGGATGATGGGAAAAACGAAATGCATTTTGTTCAAGGATAGCTTGAAGCTGGATAAATATTCACTCCCTTATTCTATCACGGAAAGCCTCCACCTAACAATGATGAGTGCTGCATTTCACAATGTGCTAGTAAGAGTTTTCGACAACAAGCTCCATAATTACAACTACGTCAAGGTTCGAGGTTGTCTACCAGGAAGCAGAGTCTCAAGGCACTTCAAGAATCGAACAAGAGGGTCCACCATTACTATTAGACTCCCCAGCTGCACCTCAGTGCTGGGATTTCTTCTTTCCGTGGTTATCTCTCCAGGTGTTGCTAATGCTAACATTTACTGCAGATGTTACTCAGCAGATGGGACACCTATCGGTGAGAAAACTCGATGGTACTCTGTGATTGAAAGCTTGAATTCGGATAATGTGTTTATGTGGTATGATCCATACTTCAGTGACAGCATTCTCAAGCTTCATGAAACACATGTCTCTTTCAAATTCTATAGTGAAGAAGGATTGGAATTGGATATAATAAAAGAATGCGGTGTCCACGTAATAGGTCCCTCTGAGTTCCAGAGTGTTTTAGGGGAGATGGATTTGGAGTATGAGCAGAAAGTGGAGTTGGGAGTGAAGTTAGGATTGGCGTTAGACATCCAGCGCCAGGTGGATTCTAACGTGGATTTGCCTAATTTGCTGTTTGCGTTCGAGTATGGATGGAAGTTACAACCGCCAATGCAATCTGAGCTTGAATCACGACGCAGAGCCATGGCCGATGTAATTCGGAAACAGATGTGGGACCTCATCTTTCCACCTTGTCCAGCTGCTGGAATGTGGGGAAACATCACACAGGATTTTGAAGATAGAGGGCTGGGCAGCGGCCATGGCGGTGAAAAGGTAAGGAGTAAGGACAAGGGTATCGCCAGAGTTTCGCTGCTGCCATCGGAGTTTGAACCGTTTGGGAGATAA 3588 0.4183 MANTAAGSSSVSPKTYDVFLCFRGEDTGENFTCHLSAGLVDEGIEIYKYDDQLVKGCDIWTQISLAIEGSRVSVVVFSQDFASSKWCLEELVKIMECRRDMGQVVIPVFYNIDPAHVRYQKESYKKSFARHEWNLCKNQQKIRRWREALTEAANLAGWVSGSPGIRDDSELIRHIVKDVLQKLKQRRPNTTKYLVGIEKTQKDIEMLLQNAKIIGIWGPGGIGKTTIGKVVYNKLSSQYDSVCLMENISEETRRYGLPRLCRNLFSDLLKEDNPTHNVRRLQTKKALIVFDDVDSFKQLEYLCEDSQVLSYLGEDSRVIITSRNRHLLANKADEIYEVKNLNLTESLKLFSLKAFSKSYPEEGYEKLSKQVVEYTGGIPLALNVLGSHLSFRLDKDFWESTMRKLENSPNEDIQKVLRVSYDGLDSLQQKIFLDIAFFFIEEEEERVKKILHASGFEPNNGLLELKDKALISTTSYDSRIQMHGLLQEMALDIVRRESELNPGGRSRLRDVKDIRDVLENNTGTNAVEGIVLDLSQIEDLQLSADVFEKMNRIRFLKFYIPRSKSSSEKYLPEGLTQFPKELRYLQWDAYPLKSLPLRLCFKFLVEIHMRHSNVEELWQGKKDLHNLEVIDLCECRKLMNLPDLSNASRLRTVNLSGCEMLHYLHPTVLSAGKLATLILDRCKNLMEVKSEKRLESLEKISVNGCLSLKEFEVWSSLIEKLDLSKTEIETLHTSIGHMENLRSLNLEGLKLKHLPNALSGLKSLKYLNLSRSGVEFDKHQLHVLFNGLQSLEKLHVTDCSNLFELPDNINVLQKLQELRLDGSSIVTLPESIKHLRVLKVLSLENCNKLVSVPELPPSITVFNASNCTSLVSVSVSTLRMMGKTKCILFKDSLKLDKYSLPYSITESLHLTMMSAAFHNVLVRVFDNKLHNYNYVKVRGCLPGSRVSRHFKNRTRGSTITIRLPSCTSVLGFLLSVVISPGVANANIYCRCYSADGTPIGEKTRWYSVIESLNSDNVFMWYDPYFSDSILKLHETHVSFKFYSEEGLELDIIKECGVHVIGPSEFQSVLGEMDLEYEQKVELGVKLGLALDIQRQVDSNVDLPNLLFAFEYGWKLQPPMQSELESRRRAMADVIRKQMWDLIFPPCPAAGMWGNITQDFEDRGLGSGHGGEKVRSKDKGIARVSLLPSEFEPFGR* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0517 1195 Pfam NB-ARC domain 207 427 IPR002182 GO:0043531
Amo19g0517 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 435 IPR027417 -
Amo19g0517 1195 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Amo19g0517 1195 Pfam TIR domain 16 192 IPR000157 GO:0007165
Amo19g0517 1195 Gene3D - 13 180 IPR035897 -
Amo19g0517 1195 PRINTS Disease resistance protein signature 375 389 - -
Amo19g0517 1195 PRINTS Disease resistance protein signature 213 228 - -
Amo19g0517 1195 PRINTS Disease resistance protein signature 622 638 - -
Amo19g0517 1195 PRINTS Disease resistance protein signature 280 294 - -
Amo19g0517 1195 SUPERFAMILY "Winged helix" DNA-binding domain 412 500 IPR036390 -
Amo19g0517 1195 SMART till_3 15 155 IPR000157 GO:0007165
Amo19g0517 1195 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1046 IPR044974 GO:0006952
Amo19g0517 1195 Gene3D - 340 425 IPR042197 -
Amo19g0517 1195 Pfam Leucine Rich Repeat 603 622 IPR011713 -
Amo19g0517 1195 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1046 - -
Amo19g0517 1195 Pfam Leucine rich repeat 719 771 IPR001611 GO:0005515
Amo19g0517 1195 Gene3D - 181 339 IPR027417 -
Amo19g0517 1195 SUPERFAMILY L domain-like 531 896 - -
Amo19g0517 1195 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Amo19g0517 1195 Gene3D Ribonuclease Inhibitor 717 906 IPR032675 -
Amo19g0517 1195 Gene3D Ribonuclease Inhibitor 504 716 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0517 Amo-Chr19 7650143 7665053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0517 788 905 WRKY Transcription Factor Family AT4G12020 36.290 5.80e-08 55.5