Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0511 ATGAAAAGGTCAACTCATAGCGGTACACGTAAGAGTGAGAGGGGTGGTGGTGGTGGTGATAAGAGCAAGAAGAAATGGAAGCTATGGAGAAGTTCTTCAGAAGGGTTTGGTTTTGGATCCTCGACGAAGAAGGGTGACGGTTCTCACAAGGCCTTTTCTTCTTTGGTGGATGATGAAGTAGCTTTTAATGCCGCGGTGGCAACAGTGGTGAGAGCGCCCCACAAAAATTTCATGGTGATCAAGCAGGAATGGGCTGCTATACGCATTCAAGCCATTTTTCGAGGCTTCTTGGCAAGACGAGCTTTGAGGGCGTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTCGTGGAAGGCTAGTGAGGAAGCAAGCTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTGCGCGCTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATTAAGGAGGCTGAGGACGGCTGGTGCGACATTCCAGGAACAGCAGAGGAAGTTAAAGCAAAACTTCAAATGAGGCAAGAAGGAGCAATTAAGAGGGAGAGAGCAATGGCATACTCAATGTATACCAAGCAATCAACAGTGTGTGCTAGTCCACGCTCGAGAGCTTCCAAGCCAGTCACACCTCTCAAGCAAGGCAGCCTAGACAATAAGAGCTCGCGATTGAGCATGTTAGAGCGCTGGATGGCGACAAAGCCATGGGAGAGCAGGCTAATGGAGGAGAACAATTTCGGCTCGCTTGACATGACTCCAGTGTCTGGAAAATGTGATGATCTTGTTGCTCCCTTCAATTCACTTCAACAAAGAGGCTTATCCAAAGCAAGAAGCAGCGGTGCAATAACAAGAATTTCTTCCAAGTCTCTCACAACTACTCAATCAACTCCATCTTCTTCGGGTGTTAGCTCCGAATGCATGTATGATGATAGCCCTGCCTCAACCTCATGTACATCTGGATCACTGCCATCGATCAACAATGTTGTGGACGAAGCAGCAGAGGATAGAAGTGTTAATAAACCAACCTACATGAATCTGACAGAATCAACCAAAGCTAAACTGAAATCTTGTAGGTGTTCCTCTCAGAATTCGAAGAGACTCTTAATGGATGACTGTCATTCTCATTGCTCAAGATCAGAATTTCTAAATGGAGACAATAGAAGCAGTTGTGGATCCTATCCTTCAGTCAATTCGTGGAGGGATCTATACGCAACACCTTCAAGAGCAAGTTATCAGAAACGATTAAATTCGGATGATAAGTAA 1317 0.4647 MKRSTHSGTRKSERGGGGGDKSKKKWKLWRSSSEGFGFGSSTKKGDGSHKAFSSLVDDEVAFNAAVATVVRAPHKNFMVIKQEWAAIRIQAIFRGFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQTLLDQYRNQADPIKEAEDGWCDIPGTAEEVKAKLQMRQEGAIKRERAMAYSMYTKQSTVCASPRSRASKPVTPLKQGSLDNKSSRLSMLERWMATKPWESRLMEENNFGSLDMTPVSGKCDDLVAPFNSLQQRGLSKARSSGAITRISSKSLTTTQSTPSSSGVSSECMYDDSPASTSCTSGSLPSINNVVDEAAEDRSVNKPTYMNLTESTKAKLKSCRCSSQNSKRLLMDDCHSHCSRSEFLNGDNRSSCGSYPSVNSWRDLYATPSRASYQKRLNSDDK* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0511 438 MobiDBLite consensus disorder prediction 303 325 - -
Amo19g0511 438 PANTHER IQ-DOMAIN 5-RELATED 10 433 - -
Amo19g0511 438 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Amo19g0511 438 ProSiteProfiles IQ motif profile. 82 110 IPR000048 GO:0005515
Amo19g0511 438 SMART iq_5 81 103 IPR000048 GO:0005515
Amo19g0511 438 SMART iq_5 104 125 IPR000048 GO:0005515
Amo19g0511 438 Gene3D - 80 133 - -
Amo19g0511 438 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Amo19g0511 438 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
Amo19g0511 438 MobiDBLite consensus disorder prediction 1 28 - -
Amo19g0511 438 MobiDBLite consensus disorder prediction 217 236 - -
Amo19g0511 438 MobiDBLite consensus disorder prediction 8 28 - -
Amo19g0511 438 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 10 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0511 Amo-Chr19 7546813 7549701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0511 23 421 IQD Protein Family AT1G72670 44.472 1.45e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0511 - - ahf:112710157 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0511 19 7546813 7549701 Amo19g0511 19 7546813 7549701 PCT