Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0502 ATGATTCGAAATGGTTGTGTTGCATCCCCACAAGTGTGTGTTCCTTTGAATTCGAGGCCGTGGAAAGGTGTCATGCCTTGTGGCTCTTTCTTATGCTGTACTTCTCAGTTTCCTGCCAAGATTGCTGTTTCCAACATTCAGAGCTCTTCCTCTTTTGGACATAGTTTTGAGTGTAAATCCTCGTTGCAAAGAGGAATGACATTCTCGAACATGTCTGTTGCATCGAGCCTACTCTCAAGTAGGGGTCATAATCCTCTATTTCGCACAATCCCTGTGTTACCGAAACGATGCAGGTCTACTACAACCGTTCAAGCATCAAAGGACGTCCCAACTAGTTGGCGTTATCCACAAATGACCAAGAAACCAAGATGGTGGTGGAGAACATTAGCGTGCCTCCCTTACCTCATGCCTCTCCACGAGACATGGATGTACGCTGAGACAGCATACAATCTTAACCCCTTTTTGGAATACTTTGAGTTCTTGACATACCCTTTTCTGGAGGCTATTGGCATGCTGCCTAGCTGGTTTCTCATGGCATACTTCTTCGTCGCCTACCTTGGAATCGTGAGGAGAAAAGAATGGCCTCACTTCTTCAGATTCCATGTTGTGATGGGAATGCTGTTGGAGATTGCATTGCAGGTTATAGGAACTGTGAGTCGCTGGATGCCGCTATCGGTTTACTGGGGTAAAATTGGAATGCATTTCTGGACCGGCGTATCATTTGCTTATCTCTTCACCGTCTTGGAGTCCATAAGGTGCGCCCTCGCCGGAATGTATGCCGATATCCCCTTTATATGCGATGCAGCATATATCCAAATACCATATGACTAA 831 0.4597 MIRNGCVASPQVCVPLNSRPWKGVMPCGSFLCCTSQFPAKIAVSNIQSSSSFGHSFECKSSLQRGMTFSNMSVASSLLSSRGHNPLFRTIPVLPKRCRSTTTVQASKDVPTSWRYPQMTKKPRWWWRTLACLPYLMPLHETWMYAETAYNLNPFLEYFEFLTYPFLEAIGMLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSVYWGKIGMHFWTGVSFAYLFTVLESIRCALAGMYADIPFICDAAYIQIPYD* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0502 276 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 27 276 - -
Amo19g0502 276 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 276 IPR005691 -
Amo19g0502 276 Pfam Chloroplast import apparatus Tic20-like 96 269 IPR005691 -
Amo19g0502 276 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 27 276 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0502 Amo-Chr19 7395664 7398359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0502 61 276 Chloroplast and Mitochondria Gene Families AT4G03320 38.813 6.28e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0502 - - adu:107464071 575.474