LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo19g0500	ATGCTGAAAATGTTTTCCCTCCCTCTCTCTATAAATACCCACCGCACCTCTCTCTCTTTCTTCAAACCAACCACACCCTCACTCACTGAGTCACTGAGTCAGCGAGTCAGAGTCCATCCACCAATGGGCGTGAATTCCACCACCACCGTCAACAAAATCCAATCGGAGTTACCGATCTCAGTGGCATCTCCGCCGTTGGAGATCCACAACGTGCGGTTGCCGCCACGGCGAAGCACCTCACAGAAGCTAAGGCAGAGGCTCTCAGACATATTCTTCCCGGACGATCCACTTCACCGGTTCAAGAACCAACCGTCATGGTTGGTGAAGCTCATGCTCGGTGTTCAGTGCATGTTCCCTATCTTCCAGTGGGGCCCAACCTATAACCTTTCCCTTTTTCGTTCTGACGTCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACCTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCCTGCTTGGAAGCTCTAAACATCTTGGAGTTGGTCCAGTCTCAATTGCATCTTTGGTGATGGGATCAATGTTAAGTGAAACAGTTTCTTACACACAAGATCCAATTCTTTATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTCTTCCAATCTTCTTTGGGAATATTAAGGTTAGGATTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTAGGATTCATGGCTGGTGCAGCCATAATTGTATCTTTGCAGCAGCTGAAAGGGTTGCTTGGAATAGTGCACTTCACCAGCAAGATGCAAATAATTCCAGTATTAGCCTCGGTTTTCAAACAAAAAGACGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGCTTCTTGGCCTTCCTCCTGATAACAAGACACATTAGCTTAAGGAAGCCAAACTTATTCTGGGTTTCAGCAGCTGCTCCATTGGCATCAGTTATTCTTTCAACAATTTTAGTCTTTCTCCTAAGAAACAAGGCTCATGGAATTGCAATTATTGGTGAATTGCCAAAAGGCCTTAATCCACCATCATCAAACATGTTATTCTTTAGTGGCCCTTATTTGGCTCTTGCTATCAAAACTGGAATTGTTACTGGGATCTTGTCTCTAACTGAAGGAATTGCAGTTGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTATCATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCGCGATCGGCTGTTAACTATAATGCTGGAGCACAGACAGCAGTCTCAAATATAATCATGGCTTCAGCAGTTCTTGTGACTCTTCTGTTTCTAATGCCACTATTCTATTACACGCCAAACGTCGTCTTAGCAGCGATTATCATCACTGCTGTGATTGGCCTAATAGATTACCAAGCTTCATATAAGCTATGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCATGTGCTCCTTTTTCGGAGTTCTGTTCATCTCAGTGCCTTTAGGCCTTAGTATTGCGGTGGCAATATCAGTGTTCAAGATATTGCTTCATGTCTCAAGACCAAACACATTGGTGTTGGGGAATATACCAGGGACAACAATATTCCACAATGTAAACCAGTATAGAGAAGCTCTTAGAATCCCTTCATTCCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACCTTCAAGAAAGGATTTTGAGATGGGTTAGAGAAGAGGAAGAGCATATCAAAGCAAACAATGGAAGTAAATTGGAGTGCATAATTTTGGACATGACAGCTGTGACAGCCATAGACACAAGTGGGATAGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAGATCACTTCAGCTGGTGTTGGCAAATCCAGTTGGAAGTGTCATGGAAAAGTTGCATCAATCAAACATTTTGGATTCCTTTGGTTTGAAAGGAGTGTATCTCACAGTTGCTGAAGCTGTGGCTGACATTTCATCCTCTTGGAAAGCACAACCTTGA	2085	0.4326	MLKMFSLPLSINTHRTSLSFFKPTTPSLTESLSQRVRVHPPMGVNSTTTVNKIQSELPISVASPPLEIHNVRLPPRRSTSQKLRQRLSDIFFPDDPLHRFKNQPSWLVKLMLGVQCMFPIFQWGPTYNLSLFRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQIIPVLASVFKQKDEWSWQTIVLGFGFLAFLLITRHISLRKPNLFWVSAAAPLASVILSTILVFLLRNKAHGIAIIGELPKGLNPPSSNMLFFSGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQASYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGSKLECIILDMTAVTAIDTSGIDTLCELRKMLEKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGVYLTVAEAVADISSSWKAQP*	695

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Amo19g0500	694	ProSiteProfiles	STAS domain profile.	563	686	IPR002645	-
Amo19g0500	694	Pfam	Sulfate permease family	132	512	IPR011547	GO:0016021
Amo19g0500	694	PANTHER	SLC26A/SULP TRANSPORTER-RELATED	57	694	-	-
Amo19g0500	694	SUPERFAMILY	SpoIIaa-like	568	685	IPR036513	-
Amo19g0500	694	ProSitePatterns	SLC26A transporters signature.	161	182	IPR018045	GO:0008271\|GO:0008272
Amo19g0500	694	Gene3D	STAS domain	543	688	IPR036513	-
Amo19g0500	694	PANTHER	SULFATE TRANSPORTER	57	694	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Amo19g0500	694	TIGRFAM	sulP: sulfate permease	119	682	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Amo19g0500	694	CDD	STAS_SulP_like_sulfate_transporter	564	679	-	-
Amo19g0500	694	Pfam	STAS domain	564	682	IPR002645	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo19g0500	Amo-Chr19	7366523	7371484	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo19g0500	66	694	Inorganic Solute Cotransporters	AT3G15990	77.338	0.0	1028

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo19g0500	K17471		-	gmx:100780331	1117.45

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo19g0500	19	7366523	7371484	Amo19g0500	19	7366523	7371484	ECH

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