Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0500 ATGCTGAAAATGTTTTCCCTCCCTCTCTCTATAAATACCCACCGCACCTCTCTCTCTTTCTTCAAACCAACCACACCCTCACTCACTGAGTCACTGAGTCAGCGAGTCAGAGTCCATCCACCAATGGGCGTGAATTCCACCACCACCGTCAACAAAATCCAATCGGAGTTACCGATCTCAGTGGCATCTCCGCCGTTGGAGATCCACAACGTGCGGTTGCCGCCACGGCGAAGCACCTCACAGAAGCTAAGGCAGAGGCTCTCAGACATATTCTTCCCGGACGATCCACTTCACCGGTTCAAGAACCAACCGTCATGGTTGGTGAAGCTCATGCTCGGTGTTCAGTGCATGTTCCCTATCTTCCAGTGGGGCCCAACCTATAACCTTTCCCTTTTTCGTTCTGACGTCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACCTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCCTGCTTGGAAGCTCTAAACATCTTGGAGTTGGTCCAGTCTCAATTGCATCTTTGGTGATGGGATCAATGTTAAGTGAAACAGTTTCTTACACACAAGATCCAATTCTTTATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTCTTCCAATCTTCTTTGGGAATATTAAGGTTAGGATTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTAGGATTCATGGCTGGTGCAGCCATAATTGTATCTTTGCAGCAGCTGAAAGGGTTGCTTGGAATAGTGCACTTCACCAGCAAGATGCAAATAATTCCAGTATTAGCCTCGGTTTTCAAACAAAAAGACGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGCTTCTTGGCCTTCCTCCTGATAACAAGACACATTAGCTTAAGGAAGCCAAACTTATTCTGGGTTTCAGCAGCTGCTCCATTGGCATCAGTTATTCTTTCAACAATTTTAGTCTTTCTCCTAAGAAACAAGGCTCATGGAATTGCAATTATTGGTGAATTGCCAAAAGGCCTTAATCCACCATCATCAAACATGTTATTCTTTAGTGGCCCTTATTTGGCTCTTGCTATCAAAACTGGAATTGTTACTGGGATCTTGTCTCTAACTGAAGGAATTGCAGTTGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTATCATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCGCGATCGGCTGTTAACTATAATGCTGGAGCACAGACAGCAGTCTCAAATATAATCATGGCTTCAGCAGTTCTTGTGACTCTTCTGTTTCTAATGCCACTATTCTATTACACGCCAAACGTCGTCTTAGCAGCGATTATCATCACTGCTGTGATTGGCCTAATAGATTACCAAGCTTCATATAAGCTATGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCATGTGCTCCTTTTTCGGAGTTCTGTTCATCTCAGTGCCTTTAGGCCTTAGTATTGCGGTGGCAATATCAGTGTTCAAGATATTGCTTCATGTCTCAAGACCAAACACATTGGTGTTGGGGAATATACCAGGGACAACAATATTCCACAATGTAAACCAGTATAGAGAAGCTCTTAGAATCCCTTCATTCCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACCTTCAAGAAAGGATTTTGAGATGGGTTAGAGAAGAGGAAGAGCATATCAAAGCAAACAATGGAAGTAAATTGGAGTGCATAATTTTGGACATGACAGCTGTGACAGCCATAGACACAAGTGGGATAGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAGATCACTTCAGCTGGTGTTGGCAAATCCAGTTGGAAGTGTCATGGAAAAGTTGCATCAATCAAACATTTTGGATTCCTTTGGTTTGAAAGGAGTGTATCTCACAGTTGCTGAAGCTGTGGCTGACATTTCATCCTCTTGGAAAGCACAACCTTGA 2085 0.4326 MLKMFSLPLSINTHRTSLSFFKPTTPSLTESLSQRVRVHPPMGVNSTTTVNKIQSELPISVASPPLEIHNVRLPPRRSTSQKLRQRLSDIFFPDDPLHRFKNQPSWLVKLMLGVQCMFPIFQWGPTYNLSLFRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQIIPVLASVFKQKDEWSWQTIVLGFGFLAFLLITRHISLRKPNLFWVSAAAPLASVILSTILVFLLRNKAHGIAIIGELPKGLNPPSSNMLFFSGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQASYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGSKLECIILDMTAVTAIDTSGIDTLCELRKMLEKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGVYLTVAEAVADISSSWKAQP* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0500 694 ProSiteProfiles STAS domain profile. 563 686 IPR002645 -
Amo19g0500 694 Pfam Sulfate permease family 132 512 IPR011547 GO:0016021
Amo19g0500 694 PANTHER SLC26A/SULP TRANSPORTER-RELATED 57 694 - -
Amo19g0500 694 SUPERFAMILY SpoIIaa-like 568 685 IPR036513 -
Amo19g0500 694 ProSitePatterns SLC26A transporters signature. 161 182 IPR018045 GO:0008271|GO:0008272
Amo19g0500 694 Gene3D STAS domain 543 688 IPR036513 -
Amo19g0500 694 PANTHER SULFATE TRANSPORTER 57 694 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo19g0500 694 TIGRFAM sulP: sulfate permease 119 682 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo19g0500 694 CDD STAS_SulP_like_sulfate_transporter 564 679 - -
Amo19g0500 694 Pfam STAS domain 564 682 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0500 Amo-Chr19 7366523 7371484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0500 66 694 Inorganic Solute Cotransporters AT3G15990 77.338 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0500 K17471 - gmx:100780331 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0500 19 7366523 7371484 Amo19g0500 19 7366523 7371484 ECH