Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0494 ATGGGAAAGTCTTCTATTTTGCTTGTCAATGGAAGCCTTCAAAGGAGAATACATGGACTCCTTGGATCTTTCTTCAAGTCTCACATTCTCAAGGCTCAGATTACTACAGATATGCATAACTATGTTCAAGAATCCATGGCAAATTGGACTGAGGAATCCCCCATTTACATACAAGATGAAACAAAAAAGATTGCCTTTCAATTATTAGTGAAGGCATTGATTAATTTGGATCCAAGTGAAGAGATGGAGCTTATAAGGAAATATTTTCAAGAATTCATCTCTGGCATTATGTCTTTACCCATAAACCTACCAGGAACTCAACTTCATCAATCTTTACAAGCAAAAAAGAAAATGGTGAAATTAGTGCTAAGAATAATCCAAGAAAGAAGAAAWRGTGGCATCACCAAAGTTCCAAAGGATGTATTAGATGTGCTTCTTAATGATTCAAKTGAGGAATTAACAGATGATTTGATAGCACATAACATTATSGATATGATGATTCCTGGAGAGGACTCAGTGCCACTTCTTATCACATTAGCTATCAAGTATTTATCTGAATATCCTGCTGCTTTGCAACAATTAACGGTTATCACAGAAACTTTGAGAATGGGAAATATTATAATTGGTGCTATGAGAAAGGCAACAAAAGATGTTAAAATAAAAGGGTACTTAATACCAAAAGGGTGGTGTGTTCTTGCAAATTTTAGATCGGTTCATCTAGATGAAAAAAATTATGACATCCCATATCAATTCAATCCATGGAGGTGGCAAAAATTTCAGGACAAAGAGTTAAACAACTGTAATTTCACACCTTTTGGAGGTGGACAAAGACTGTGTCCTGGACTTGAATTAGCTAGGCTTGAAGCTTCTATATTTCTACACCACTTTGTTACTCAGTTCAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCCACTGTAAGAATGAAAAGGAAGATGCCTATCTTTGTGAAGAGAGTAGAATCTTGA 993 0.3535 MGKSSILLVNGSLQRRIHGLLGSFFKSHILKAQITTDMHNYVQESMANWTEESPIYIQDETKKIAFQLLVKALINLDPSEEMELIRKYFQEFISGIMSLPINLPGTQLHQSLQAKKKMVKLVLRIIQERRXXGITKVPKDVLDVLLNDSXEELTDDLIAHNIXDMMIPGEDSVPLLITLAIKYLSEYPAALQQLTVITETLRMGNIIIGAMRKATKDVKIKGYLIPKGWCVLANFRSVHLDEKNYDIPYQFNPWRWQKFQDKELNNCNFTPFGGGQRLCPGLELARLEASIFLHHFVTQFRWYAEEDTIVNFPTVRMKRKMPIFVKRVES* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0494 330 Pfam Cytochrome P450 196 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0494 330 SUPERFAMILY Cytochrome P450 4 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0494 330 PANTHER CYTOCHROME P450 26 196 323 - -
Amo19g0494 330 Gene3D Cytochrome P450 1 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0494 330 PRINTS E-class P450 group I signature 279 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0494 330 PRINTS E-class P450 group I signature 234 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0494 330 PRINTS E-class P450 group I signature 157 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0494 330 PRINTS E-class P450 group I signature 269 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0494 330 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 1 195 - -
Amo19g0494 330 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 196 323 - -
Amo19g0494 330 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 272 281 IPR017972 GO:0005506|GO:0016705
Amo19g0494 330 PANTHER CYTOCHROME P450 26 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0494 Amo-Chr19 7259893 7264473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0494 1 301 Cytochrome P450 AT3G13730 58.036 4.18e-137 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0494 K12638 - gmx:100797868 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0494 19 7259893 7264473 Amo19g0494 19 7259893 7264473 ECH
Amo19g0494 19 7259893 7264473 Amo09g0200 09 2147009 2150091 hybridization