Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0471 ATGTCATGGTTAGAATTCAATAAGGCTCTAGAGAAATGCCAACTTAAGGAAACAATTAGTTGTCTACCAAATCTCTTGGACTCTTCTGGCGATGATGAAGGTGAAAACTGGAGTGTAGGGCAGCGCCAACTGTTTTGTCTAGGAAGAGTACTTCCTAAGAGGAACAGAATTCTTGTACTGGATGAAGCTACTGCCTCCATTGATTCCGCCACCGACGCCATTTTACAACGAGTTATCAGAGAAGAATTCTCAGAATGCACAGTTATAACGGTGGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTGTCTTATGGGAAATTGATTGAGTATGATGAGCCTTCAAAGCTTATGGAGAGAGATTCTTCATTCTATAAGCCGGTGTCAGAATATTGGTCCAACTGCAACAAGAATGTTCTCCAAAAAGACTAG 444 0.4189 MSWLEFNKALEKCQLKETISCLPNLLDSSGDDEGENWSVGQRQLFCLGRVLPKRNRILVLDEATASIDSATDAILQRVIREEFSECTVITVAHRVPTVIDSDMVMVLSYGKLIEYDEPSKLMERDSSFYKPVSEYWSNCNKNVLQKD* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0471 147 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 9 133 - -
Amo19g0471 147 Gene3D - 2 144 IPR027417 -
Amo19g0471 147 PANTHER BNAA01G25250D PROTEIN 9 133 - -
Amo19g0471 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 132 IPR027417 -
Amo19g0471 147 Pfam ABC transporter 7 65 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0471 Amo-Chr19 6638851 6640066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0471 4 124 Calmodulin-binding Proteins AT2G36910 28.926 1.72e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0471 - - ahf:112777795 235.728