Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo19g0455 | ATGGTGCCATCACCAGATAATACTAGTAGCCACGGTAGAGATTGTGGAAAGCTTCTTGCCCCATCATCAAACTCATGTAAGCTACTAAAAAAATATCCGCAAAATAAGAGACGGTTACAGTGTAAGTTTTGCAACAAGAAATTCTCCAATAGCCAAGCTTTGGGAGGGCATCAGAATGCACACAAATTGGAGAGAGCCGCGGTGAAGAGAGACAACATTCTCGCCATGGCGTCTGCTTATAGCAACTACTTACCACCATTTCAGTCTAATATGCAAAATTATTATTCAAATTTTTCTGCTTTTAGTCATAGTAGTAGAACATTAGGGATGCAACAACCACAAGCAATGATTCATAATAGGTCTTCAACTGCACTTGGACCTGGATACCTTCATAATATATTGTTGGGAAATCAAATCATGGATCTTCAATGCAGCAGGCAAAAAGAAATATTGACAGTGAATCTGTTACCACAACAGTCACCGTTGAGTTTAGGTGAAAACATGAATCCAAACCAAACAAATAAACAACAACAACAACCAGGTGCAGGGAATAACAAACCTCAAGGAGAGATCGATTTGACACTCAAGCTCTAA | 594 | 0.3923 | MVPSPDNTSSHGRDCGKLLAPSSNSCKLLKKYPQNKRRLQCKFCNKKFSNSQALGGHQNAHKLERAAVKRDNILAMASAYSNYLPPFQSNMQNYYSNFSAFSHSSRTLGMQQPQAMIHNRSSTALGPGYLHNILLGNQIMDLQCSRQKEILTVNLLPQQSPLSLGENMNPNQTNKQQQQPGAGNNKPQGEIDLTLKL* | 198 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo19g0455 | 197 | MobiDBLite | consensus disorder prediction | 161 | 197 | - | - | |
Amo19g0455 | 197 | SUPERFAMILY | beta-beta-alpha zinc fingers | 36 | 66 | IPR036236 | - | |
Amo19g0455 | 197 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 39 | 66 | IPR013087 | - | |
Amo19g0455 | 197 | MobiDBLite | consensus disorder prediction | 161 | 185 | - | - | |
Amo19g0455 | 197 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 32 | 197 | IPR044246 | GO:0009788 | |
Amo19g0455 | 197 | Gene3D | Classic Zinc Finger | 22 | 83 | - | - | |
Amo19g0455 | 197 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 41 | 61 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo19g0455 | Amo-Chr19 | 6289570 | 6291073 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo19g0455 | 35 | 119 | C2H2 Transcription Factor Family | AT1G24625 | 35.294 | 8.42e-11 | 57.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Amo19g0455 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo19g0455 | - | - | ahf:112708745 | 309.301 |