Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0453 ATGGTGAAGTTCTTGAAACCAAACAAAGCGGTTATTGTGCTGCAAGGTCAATACACGGGTCAAAAAGCCGTCATCATACGCGCCTTCGACGATGGCACCCGCGACCGCCCCTACGGCCACTGCCTCGTCGCCGGGATCAAGAAGTACCCTTCCAAGGTTGTTAAGAGGGACTCCGCCAAGAAGACGGCGAAGAAGTCGCTCGTCAAGGCATTCGTTAAGATGGTTAACTACCAACACGTGATACCCACGCGCTACACGCTTGACGTGGATTTGAAGGACGCCGTCACAGTCGAGTCTCTTTAG 303 0.5347 MVKFLKPNKAVIVLQGQYTGQKAVIIRAFDDGTRDRPYGHCLVAGIKKYPSKVVKRDSAKKTAKKSLVKAFVKMVNYQHVIPTRYTLDVDLKDAVTVESL* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0453 100 CDD KOW_RPL27 6 88 IPR041991 -
Amo19g0453 100 SUPERFAMILY Translation proteins SH3-like domain 2 92 IPR008991 -
Amo19g0453 100 Pfam Ribosomal L27e protein family 52 99 IPR001141 GO:0003735|GO:0005840|GO:0006412
Amo19g0453 100 PANTHER 60S RIBOSOMAL PROTEIN L27 1 100 IPR001141 GO:0003735|GO:0005840|GO:0006412
Amo19g0453 100 Gene3D - 1 100 IPR038655 -
Amo19g0453 100 PANTHER 60S RIBOSOMAL PROTEIN L27 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0453 Amo-Chr19 6279439 6279741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0453 1 100 Cytoplasmic Ribosomal Protein Gene Family AT4G15000 76.000 2.65e-56 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0453 K02901 - jre:108985511 177.948