Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0395 ATGATGAAAGTACACCACAAAAATCTTACTTCCCTTATTGGATATTGCAATGAAGAGAAAAATAAAGCTCTCATCTATGAATACATGGCAAATGGAGACTTGGATGAACATCTCTTAGGGAAGAAAAGCAACACAAAGTTCTTAACTTGGGAAGATAGACTTCGAATAGCTGTGGATGCAGCCCAAGGACTGGAATATCTGCATCATGGTTGTAAGCCGTTAATAATTCACAGAGATGTGAAATGCGCAAATATTTTGTTAACTGAAAACTTCCAAGCCAAATTGGCTGATTTTGGCCTATCCAGAAGCTTTCTTGCTGACGGTGACACGCATATCTCCACTGCCATTGTTGCCGGAACTCTTGGTTACTTAGATCCTCAGTGTACCATGTTAAACAGGTTCACAGAGAAAAGTGATGTTTACAGTTTCGGAGTAGTTCTTTTGAAGATAATCACAGGTCAACCGGCAATATCAAAAACCAAAGATAAAGTTCATATAAGTCACCGTGTTGATTCCTTACTTTCTAAAGGGGATATAGAAGGTATTGTTGACTCAGAATTACAAGGAGATTTTGATAGTAGTTCTGTCTGGAAAGCTGTTGAAATAGCAATGGCTTCTGTGTCATATAGCCCTGACAAAAGGCCATACATGAGTGATGTATTGGTTGTGTTAAAGGAATGTTTGGCAATAGAGTTGGCTCGGAAACAATCCAACATTGACACAGAAAACACTGATTTAATTGAGTTCACCTATAATCTGACTTCTGAAACTGGCCCTTTAGTGAGCATAGATTGTGGTCTACCTCAAAATTCCAGCTACACTGAGAAGCACACAAGCATATTCTACATTTCTGATTCTGGATTCATTGACACTGGTGTAAGCAAGAGTGTATCACCTGAATTCAAGATCAATCTTCAACAACAACTAAGCAATTTGAGAAGCTTTCCAAGTGGAATAAGAAACTGTTACAGAATAAATGTGACAAGTGCTACAAAATACTTAATCAGAGCTAGTTTCTATTATGGAAACTATGATGGGACAAATGTGGCACCAAAATTTGATCTTCATCTTGGTGCTAATTTCATGGACACAGTGAAATTCACCAATGCATCAGTTACCACATTCAGTGAGATCATTTACACTCCATTATTGGACTATATTCATCTTTGTCTAGTTAACACAGGCACAGGCACACCATTCATTTCTGCTATAGAATTGAGGACTTTGAAGAATGATACTTATGTGACTCAATCATGGGAATCGTTGGCGCGCCTCCGGCGATTCGACTTAGGTTCCACCACCAACTTACAATACAGGTACAAGGATGATGTTTATGACAGAATTTGGGCACCACTAGGCTTTGATCTATGGACACAAATAAGCAGCAAACTCACCAATGATGAACTAACTCAGAATCATTACCAACCACCAACAATTGTAATGAGCACAGCCGCCACGCCGGTAAACGCTAGCGCTTCTTTCGATTTCTACTGGGATCCTGATAATGTGGATGAGCAATACTATGTGTTCATGCATTTTAATGAAGTTAAGAAGCTAGCACCAAATGAAACAAGATCATTCAATGTAACACTTAATGGAAAGTATTGGGGTGGACCTCTTGTACCTACATACCAATCAACATCCACCATTTTTAGTCCTTCAGCTTTGGCAGGAGAGTCTAGGTACCTGTTTTCGCTTCTCCGGACAGAGGATTCGGCGCTTCCTCCAATCATCAATGCCATTGAGATTTATACAGTTAAAGATTTCTCAAGACCAGAAACTTCACAAGATGATGTTGATGCTATCACAAACATCAAGAAAGCTTATGGAGTGGCCAGAAATTGGGAAGCTGATCCATGTGGCCCCACAAAATACATTTGGCAAGGTCTAAATTGTAGTTATGATGGCAATGATCCCCCAAGAATCACATCCTTGGATTTATCAAACAATAACTTAAGTGGATCAGTACCTGATTTCCTAACACAACTTCAGTCATTGAAAGTATTAAACTTGGGAAACAACAATCTCACAGGCTTAGTTCCCAATGGACTCCTTGATAAATCAAAGAAAGGTTCACTATCATTGAGTGTGGAACACAATCCAAATCTATGTGCATCAACTTCATGCAACCAACAAACAGCATCAATTGCTGGGGTTTTGGTGCTTCTAGCAATTGTAGCAACAGCTGTTATCTGTGGACTTAAAAAGAGAAAGCCAAAAGCTGTGAACATTGATGAAGAACACAATGCTCCAAATTTTTCACAATTTGGACCCAACCAAAGACAATATACATTCAATGAAATTGTTAAGATCACCAACAACTTCAATAGAATTCTTGGTAGAGGTGGATTTGGTACAGTTTACCATGGACTAATTGGTGATACTCAAGTAGCTGTCAAGATGCTTTCACCATCGGCAGTGCGAGGATATGAACAATTTCTAGCAGAAGTTAAACTTCTGATGGTAGTACACCATAGAAATCTCACTTCTCTTATTGGTTATTGCAATGATGAAAGCAATATAGGACTCATCTATGAATACATGGCGAATGGAAACTTAGAAGAACATCTTTCAGGAAAAAAGAACAATGCAAAGTTGTTGACATGGGAAGATAGACTCCGAATATCAGTGGATGCAGCACAAGGATTGGAATATCTGCATAGCGGTTGCAAGCCACCTATAATCCATAGAGATGTGAAATGTGCAAACATTTTATTAAATGAAAACTTTGGTGCAAAATTGGCTGATTTTGGACTATCCAAACCTTTTCCCACTGAAGAAGGCACACACATTTCAACTGTTGTTGCTGGAACTCCTGGTTACTTAGATCCTGAGTATCGCGATTCAAACAAGTTGGCAGAGAAGAGTGATGTTTACAGCTTTGGAGTAGTTCTTTTGAAGATGATCACAGGTCAAGCAGCCTATGTGAAAATGCAGGACGACGACAACAAGCCTCACATAAGTTATTGGGTTAGTTCCATGCTTTCCAATGGAGACATAAAGAGCATTGTTGACTCAAAGTTACAAGAAGATTTTGACAGTGGCTCTGTGTGGAAAGCTGTTGAAACAGCAATGGCTTGTGTGGCATCTAGTTCTAACAAGAGGCCTCACATGAGTGATGTTGTGACTGAGCTAAAGGAGTGTTTGGCTGCAGAATTAGCACGCAAAAGAACTGATCATGCCACTGAACAAAGTGATTCACTTGAGAGTGACTTGGCTTCCATAAGTGTCACTACAACTGAATTTGAACCCATAGCTAGGTAG 3264 0.3937 MMKVHHKNLTSLIGYCNEEKNKALIYEYMANGDLDEHLLGKKSNTKFLTWEDRLRIAVDAAQGLEYLHHGCKPLIIHRDVKCANILLTENFQAKLADFGLSRSFLADGDTHISTAIVAGTLGYLDPQCTMLNRFTEKSDVYSFGVVLLKIITGQPAISKTKDKVHISHRVDSLLSKGDIEGIVDSELQGDFDSSSVWKAVEIAMASVSYSPDKRPYMSDVLVVLKECLAIELARKQSNIDTENTDLIEFTYNLTSETGPLVSIDCGLPQNSSYTEKHTSIFYISDSGFIDTGVSKSVSPEFKINLQQQLSNLRSFPSGIRNCYRINVTSATKYLIRASFYYGNYDGTNVAPKFDLHLGANFMDTVKFTNASVTTFSEIIYTPLLDYIHLCLVNTGTGTPFISAIELRTLKNDTYVTQSWESLARLRRFDLGSTTNLQYRYKDDVYDRIWAPLGFDLWTQISSKLTNDELTQNHYQPPTIVMSTAATPVNASASFDFYWDPDNVDEQYYVFMHFNEVKKLAPNETRSFNVTLNGKYWGGPLVPTYQSTSTIFSPSALAGESRYLFSLLRTEDSALPPIINAIEIYTVKDFSRPETSQDDVDAITNIKKAYGVARNWEADPCGPTKYIWQGLNCSYDGNDPPRITSLDLSNNNLSGSVPDFLTQLQSLKVLNLGNNNLTGLVPNGLLDKSKKGSLSLSVEHNPNLCASTSCNQQTASIAGVLVLLAIVATAVICGLKKRKPKAVNIDEEHNAPNFSQFGPNQRQYTFNEIVKITNNFNRILGRGGFGTVYHGLIGDTQVAVKMLSPSAVRGYEQFLAEVKLLMVVHHRNLTSLIGYCNDESNIGLIYEYMANGNLEEHLSGKKNNAKLLTWEDRLRISVDAAQGLEYLHSGCKPPIIHRDVKCANILLNENFGAKLADFGLSKPFPTEEGTHISTVVAGTPGYLDPEYRDSNKLAEKSDVYSFGVVLLKMITGQAAYVKMQDDDNKPHISYWVSSMLSNGDIKSIVDSKLQEDFDSGSVWKAVETAMACVASSSNKRPHMSDVVTELKECLAAELARKRTDHATEQSDSLESDLASISVTTTEFEPIAR* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0395 1087 CDD STKc_IRAK 779 1047 - -
Amo19g0395 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 894 906 IPR008271 GO:0004672|GO:0006468
Amo19g0395 1087 Pfam Malectin-like domain 263 586 IPR024788 -
Amo19g0395 1087 SUPERFAMILY Protein kinase-like (PK-like) 1 224 IPR011009 -
Amo19g0395 1087 PANTHER OS07G0107800 PROTEIN-RELATED 1 259 - -
Amo19g0395 1087 ProSiteProfiles Protein kinase domain profile. 773 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0395 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Amo19g0395 1087 Gene3D Ribonuclease Inhibitor 599 713 IPR032675 -
Amo19g0395 1087 ProSitePatterns Protein kinases ATP-binding region signature. 779 800 IPR017441 GO:0005524
Amo19g0395 1087 SUPERFAMILY Protein kinase-like (PK-like) 751 1045 IPR011009 -
Amo19g0395 1087 Gene3D Phosphorylase Kinase; domain 1 760 847 - -
Amo19g0395 1087 SMART serkin_6 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0395 1087 SMART serkin_6 773 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0395 1087 Gene3D Transferase(Phosphotransferase) domain 1 30 250 - -
Amo19g0395 1087 Gene3D Transferase(Phosphotransferase) domain 1 848 1072 - -
Amo19g0395 1087 PANTHER PUTATIVE-RELATED 260 1085 - -
Amo19g0395 1087 SUPERFAMILY L domain-like 627 685 - -
Amo19g0395 1087 PANTHER OS07G0107800 PROTEIN-RELATED 260 1085 - -
Amo19g0395 1087 Pfam Protein tyrosine and serine/threonine kinase 1 163 IPR001245 GO:0004672|GO:0006468
Amo19g0395 1087 Pfam Protein tyrosine and serine/threonine kinase 775 1045 IPR001245 GO:0004672|GO:0006468
Amo19g0395 1087 Pfam Leucine rich repeat 640 684 IPR001611 GO:0005515
Amo19g0395 1087 ProSiteProfiles Leucine-rich repeat profile. 665 686 IPR001611 GO:0005515
Amo19g0395 1087 PANTHER PUTATIVE-RELATED 1 259 - -
Amo19g0395 1087 Gene3D Phosphorylase Kinase; domain 1 1 29 - -
Amo19g0395 1087 PRINTS Leucine-rich repeat signature 642 655 - -
Amo19g0395 1087 PRINTS Leucine-rich repeat signature 663 676 - -
Amo19g0395 1087 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0395 Amo-Chr19 5219946 5231171 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0395 1 259 Receptor kinase-like Gene Family AT1G51800 56.705 8.74e-89 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g0395 Malectin_like 1.2e-113 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0395 - - gmx:100779474 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0395 19 5219946 5231171 Amo19g0395 19 5219946 5231171 ECH