Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0392 ATGCATGCAATGGCAAAGAAGATCGCAAATTCTCTTTTTCTACTGCTTGGTGCTCTTTCTTTCGTAGCCACGGTCCAAGGCCAGGATCAATCAGGATTCATTAGTATAGATTGTGGATTACCTGAAAATTCCAACTATACTGAGAAGAGCACCGGAATCAATTACATTTCAGATGCTAATTTTATTGATTCTGGTGTGAGTAAGACTGTGTCGCCCCAAGATAAGACTACTCATCCACAATATTTTACTTATCTTCGAAGTTTTTCTAATGGAATAAGAAACTGTTACAGAATAACTGTAACAAGTGTTACTAGATATTTAATCAGGGCTAGTTTCCTGTACGGAAACTATGATGGCCTTAATAAGCTCCCAGAATTTGATCTTTATCTTGGAGTTCATTTTTGGGACACGGTGAAATTCACAAATTCATCAGTAAGCATAAACTATGAAATTATACACACTCTATCGAACGATTATATCCATATCTGTATGGTTAATAAAGGCAAAGGGACACCATTCATTTCAGTTATAGAAATGAGGATTTTGGACCAGACAAATATTACTTATATCACTCAAGATCCAACTGCGTCATTGGCACGTTTTCGAAGGTTGGATTTTGGTATCAGCAACTTAACATACAGGTATAAAGATGATCCATATGACCGGATATGGGAGCCTTATTGGGACGACAAGTGGACACAATTAAGCAGTAGACTTAGCAATGATGACTTGGATCAGAATGACTTTAAACCACCAGCAGTTGTGATGGAGACTGCAGCTACACCAAAAAATGCTACTGCCTCATTAGACTTCCAGTGGGAAGATGATTATGCAGACAACAATGAAACTCAGCACCAATACTATATCTACTTACACTTCGCTGAGCTTCAGAAGCTGGGTGCAAATCAAACTAGATCATTCAATATCACCTTAAATGACGTGCCTTGGTCAATTGTGAAACCTGTATACGCTAGTTTATACACCAGATATAATTTAAACCCTTGGTTTGGACACAAAAACTATCACATTTCACTTTTCCGGACAGAATCTTCCTCCCTTCCGCCCATCATCAATGCTCTTGAGATTTATTTAGTGAAAGATTTCTCATCACAGTTAGAAACCCAAAAGGATGAYGTCACAAACATGAAGAGGACTTATAAAGTGGACAGTAGAAACTGGGAAGGAGATCCATGTGCACCCATTGCATACAAGTGGCAGGGTGTAGACTGTACCACTTATGATGGCTTTCTAAGAATCACATCCTTAAATTTGTCTTCAAGTGGACTGACCGGACATATAGCAGCTGATATATCCAAGCTTACCATGTTGAAGTCCTTAGATTTATCAGACAATGAGTTAAGTGGGACTGTTCCTTCTTTTCTGGCACAACTGCAATCACTGGAATACTTGAATTTGGCAAACAACAACCTAACAGGTTCAGTTTCAAACGAACTCCTTCAAAAACAAAGTGATGGTCTATTATCCTTGAGTGTGGGGCAAAATCCAAATCTATGTGCATCAACTTCATGCATCTCGCAATCAAATGATACAAGAAAGAAAGACAATAATGCAGTTATTGCAGTGGTAGCATCAATTGCAGGGATATTACTGCTTCTAGTGATTATAGCAGCAGTTATAATCTTTCGCCAGAGAAAGCGATATGCTGCTGCTAGGAACATTATTCTTGGGAAGCGTCGTAGTTCAATTAAGGGGTCAGAATTGGAATCGAAGCAACGACAATATTCATTTAATGAGGTTGTTAAGATGACCAACAACTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTATCATGGCTTTATTGAAGACATTCAAGTGGCTGTCAAGATGCTTTCCCTATCTTCAGTGCATGGATATCGACAATTTGTTAAGCTTCTAATGAGAGTACATCACCGAAATCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACCAATATAGGACTCATCTATGAATACATGGCAAATGGAAACTTAGATGAACATCTTTCAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTAAAATGCACAAATATCCTATTAGATGAAAACTTGCATGCCAAACTTGCTGATTTTGGATTATCCAAATGCTTTGCTGTTGACGGTGATACACATGTGTCGACAATTGTGGCTGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAATAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAAGCAGTGGTAATAGTAAGAGAAGACATGATTCATCATATAAGTCAACGGATTAATTCCATGGTTGCTGAAGGAGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAGTAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTGTGTCTTCCATTTCGGTGGAAAGACCGTACATGAGTGATATAGTGAAAGAGCTGAAGGAGTGTTTGGCTGCAGAATTAGCTCGAAAATATAGTAATTGTGACCTTCAAAATAAAGATTTAGTTGGACAGGTCAGTTTAAACTTGATTAGTACTTATATCAGTCCCATAGCTAGATTGTATGGTTTATGTACATCAGAATTCACTAGCATAGATTGTGGACTACCTGAAAATTCCAACTACACTGAGAAGAGCACAGGAATCAATTATATTTCAGATGCTAATTTCGTTGATTCTGGTGTGAGTAAGACTGTATCGCCCCAAGATAAAGCTACTCATCAACAATATTTTACTTATCTTCGGAGTTTTCCTAACGGAACAAGAAACTGTTACAGAATAAATGTAACAAGTGCTACTAGATATTTAATCAGAACTAGTTTCTTGTATGGAAACTATGATGGTCTTAATAAGCTCCCACAATTTGATATTTATCTCGGAGTTCATTTTTGGGACACAGTGAAATTCACAAATTCATCACTAAGTAAAAATTATGAGATCATACACACTCCATCACTGGATTATATCCATATCTGTATGGTTAACAAAGGCACAGGGACACCGTTCATTTCAGTTATAGAGATGAGAATTTTGAACAATGCTACTTATACCACTAAAAAGCCGTCTACATCATTGGCACTATTCCAAAGGTATAAAGATGATCCATATGATCGAATATGGGAGCCTTATTGGGACAACAAGTGGACACAATTAAGCAGCAGACTTAGCAACGAGGACTTGATTCAGCATGACTTTAAACCACCAGCAGTTGTGATGGAGACTGCAGCTACACCAAGAAACGTTACTGCTTCATTAGACTTCAACTGGGAGATTGATGATGAAACTGAGCACCAATACTATTTCTACTTACACTTCACTGAGCTTCAGAAGTTGGGTACAAATCAAACTAGATCATTCAATACCACCATAAATGACGTGCCTTGGGATGCAGCATTACAACTCAGATACCATGAAGTACACACCAGAAATACTCTAACCGGACCTTGGCTTCTAACAAAAAGGGGTCACATTTCACTTATTCGGACACAATCTTCCACCCTTCCACCCATCATCAATGCTCTTGAGATTTATTTTGCTAAAGATTTTTCAGAGTTAGAAACCCAAAGAAATGACGTGGAGGCAGTCACAAACATCAAGAGGGCTTATAGGATGAACAGTAGAAACTGGGAAGGAGATCCATGTGCTCCCATTGCATACAAGTGGCAAGGTGTAGAGTGTAGCTCTTTTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCAACGGACATATACCGGCTGATATCTCCAAGCTTACCATGTTAAAATCCCTAAACTTGGCAAACAACAATCTAACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCAACTATCCTTGAGTGTGGGACAAAATCCAAATCTATGTGCATCAACTTCATGCAACCAGCAAACAAATGATACAAGAAAGAAGAATAATAATGCAACCATTACAGTGGTAGCATCAATTGCAGGGATATTACTGCTTCTAGTAATTGTTGAAGCAGTTATAATCTTTCGCCTAAAAAAGCAATATGCTACTACGATCATTTTCGGGAAACGTCGGAATTCAATGAACGGGTCGCAATTGGAATCAAAGCAACGGCAATATTCCTTTAATGAGGTTGTTAAGATGACCAACAACTTTGATAAGATTCTAGGTAGAGGTGGATTCGGAAAAGTTTATCATGGCTTTATTGAAGACATTCAAGTGGCTGTCAAAATGCTTTCGCTATCGTCGGTTAAGCTTCTAATGAGAGTCTATCACCGAAATCTAACGTCTCTCATTGGTTATTGCAATGAAAAAACTAACATAGGACTCATCTATGAATACATGGCGAATGGAAATTTAGATGAACATCTTTCAGGAAAAAACAATAAGGAGAAGTCCTTAAATTGGGAAGATAGACTTCGAATAGCATTGGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAATGCTCCAATATTCTACTAAACGAAAAATTTCATGCCAAACTCGCTGATATTGGATTATCCAAATGTTTTGCGGCCGACAGCGATACGCATGTGTCGACAATTGTGGCTGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAACAGATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATAACAGGTCAACCGGTTATAATTTTAAGGGAAGACATGACTGATCATATAAGTCAACGAGTTAATTCTATGATTGTTGAAGGGGATATAACAAGTATTGTTGACTCAAGAATACAAGGAGATTTTGACAATGGTTCTGCATGGAGAGTGGTTGAAATTGCAATGGCTTCTGTGTCTCCCAGTTCTTTGGAAAGGCCATACATGAGTGACATAGTAAGAGAGCTAAAGGAGTGTTTGGCTGCAGAGTTAGGTCGAAAACATAATAGTTGTGACCTTCAAAATGAAGATTTAGTTGGGCACGTCAGTGTCAATTTGATTAGTACTGATATGACTCCCTTGGCTAGATAA 5112 0.3826 MHAMAKKIANSLFLLLGALSFVATVQGQDQSGFISIDCGLPENSNYTEKSTGINYISDANFIDSGVSKTVSPQDKTTHPQYFTYLRSFSNGIRNCYRITVTSVTRYLIRASFLYGNYDGLNKLPEFDLYLGVHFWDTVKFTNSSVSINYEIIHTLSNDYIHICMVNKGKGTPFISVIEMRILDQTNITYITQDPTASLARFRRLDFGISNLTYRYKDDPYDRIWEPYWDDKWTQLSSRLSNDDLDQNDFKPPAVVMETAATPKNATASLDFQWEDDYADNNETQHQYYIYLHFAELQKLGANQTRSFNITLNDVPWSIVKPVYASLYTRYNLNPWFGHKNYHISLFRTESSSLPPIINALEIYLVKDFSSQLETQKDDVTNMKRTYKVDSRNWEGDPCAPIAYKWQGVDCTTYDGFLRITSLNLSSSGLTGHIAADISKLTMLKSLDLSDNELSGTVPSFLAQLQSLEYLNLANNNLTGSVSNELLQKQSDGLLSLSVGQNPNLCASTSCISQSNDTRKKDNNAVIAVVASIAGILLLLVIIAAVIIFRQRKRYAAARNIILGKRRSSIKGSELESKQRQYSFNEVVKMTNNFDRILGRGGFGTVYHGFIEDIQVAVKMLSLSSVHGYRQFVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMANGNLDEHLSGLEYLHNGCKPPIIHRDVKCTNILLDENLHAKLADFGLSKCFAVDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQAVVIVREDMIHHISQRINSMVAEGDITKVVDSRLQGDFDSNSAWRAVEIAMASVSSISVERPYMSDIVKELKECLAAELARKYSNCDLQNKDLVGQVSLNLISTYISPIARLYGLCTSEFTSIDCGLPENSNYTEKSTGINYISDANFVDSGVSKTVSPQDKATHQQYFTYLRSFPNGTRNCYRINVTSATRYLIRTSFLYGNYDGLNKLPQFDIYLGVHFWDTVKFTNSSLSKNYEIIHTPSLDYIHICMVNKGTGTPFISVIEMRILNNATYTTKKPSTSLALFQRYKDDPYDRIWEPYWDNKWTQLSSRLSNEDLIQHDFKPPAVVMETAATPRNVTASLDFNWEIDDETEHQYYFYLHFTELQKLGTNQTRSFNTTINDVPWDAALQLRYHEVHTRNTLTGPWLLTKRGHISLIRTQSSTLPPIINALEIYFAKDFSELETQRNDVEAVTNIKRAYRMNSRNWEGDPCAPIAYKWQGVECSSFDGFLRITSLNLSSSGLNGHIPADISKLTMLKSLNLANNNLTGSVSNELLQKQSDGQLSLSVGQNPNLCASTSCNQQTNDTRKKNNNATITVVASIAGILLLLVIVEAVIIFRLKKQYATTIIFGKRRNSMNGSQLESKQRQYSFNEVVKMTNNFDKILGRGGFGKVYHGFIEDIQVAVKMLSLSSVKLLMRVYHRNLTSLIGYCNEKTNIGLIYEYMANGNLDEHLSGKNNKEKSLNWEDRLRIALDAAQGLEYLHNGCKPPIIHRDVKCSNILLNEKFHAKLADIGLSKCFAADSDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIILREDMTDHISQRVNSMIVEGDITSIVDSRIQGDFDNGSAWRVVEIAMASVSPSSLERPYMSDIVRELKECLAAELGRKHNSCDLQNEDLVGHVSVNLISTDMTPLAR* 1704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0392 1703 PRINTS Leucine-rich repeat signature 443 456 - -
Amo19g0392 1703 PRINTS Leucine-rich repeat signature 464 477 - -
Amo19g0392 1703 Gene3D Phosphorylase Kinase; domain 1 578 662 - -
Amo19g0392 1703 Pfam Protein kinase domain 594 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0392 1703 ProSitePatterns Protein kinases ATP-binding region signature. 1409 1430 IPR017441 GO:0005524
Amo19g0392 1703 SUPERFAMILY Protein kinase-like (PK-like) 1383 1663 IPR011009 -
Amo19g0392 1703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1514 1526 IPR008271 GO:0004672|GO:0006468
Amo19g0392 1703 SMART LRR_typ_2 1278 1302 IPR003591 -
Amo19g0392 1703 SMART LRR_typ_2 440 463 IPR003591 -
Amo19g0392 1703 SMART LRR_typ_2 464 488 IPR003591 -
Amo19g0392 1703 SUPERFAMILY L domain-like 1240 1299 - -
Amo19g0392 1703 Gene3D Ribonuclease Inhibitor 1213 1334 IPR032675 -
Amo19g0392 1703 Gene3D Ribonuclease Inhibitor 369 494 IPR032675 -
Amo19g0392 1703 SUPERFAMILY Protein kinase-like (PK-like) 572 835 IPR011009 -
Amo19g0392 1703 ProSiteProfiles Leucine-rich repeat profile. 466 488 IPR001611 GO:0005515
Amo19g0392 1703 Gene3D Transferase(Phosphotransferase) domain 1 663 858 - -
Amo19g0392 1703 Gene3D Transferase(Phosphotransferase) domain 1 1468 1686 - -
Amo19g0392 1703 ProSiteProfiles Protein kinase domain profile. 591 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0392 1703 SUPERFAMILY L domain-like 402 504 - -
Amo19g0392 1703 Pfam Protein tyrosine and serine/threonine kinase 1405 1662 IPR001245 GO:0004672|GO:0006468
Amo19g0392 1703 ProSitePatterns Protein kinases ATP-binding region signature. 597 618 IPR017441 GO:0005524
Amo19g0392 1703 PANTHER OS07G0107800 PROTEIN-RELATED 19 875 - -
Amo19g0392 1703 PANTHER OS07G0107800 PROTEIN-RELATED 1269 1703 - -
Amo19g0392 1703 PANTHER PUTATIVE-RELATED 1269 1703 - -
Amo19g0392 1703 PANTHER PUTATIVE-RELATED 19 875 - -
Amo19g0392 1703 PANTHER PUTATIVE-RELATED 882 1297 - -
Amo19g0392 1703 SMART serkin_6 591 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0392 1703 SMART serkin_6 1403 1656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0392 1703 ProSiteProfiles Protein kinase domain profile. 1403 1691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0392 1703 PANTHER OS07G0107800 PROTEIN-RELATED 882 1297 - -
Amo19g0392 1703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Amo19g0392 1703 Pfam Malectin-like domain 36 364 IPR024788 -
Amo19g0392 1703 Pfam Malectin-like domain 887 1200 IPR024788 -
Amo19g0392 1703 Gene3D Phosphorylase Kinase; domain 1 1384 1467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0392 Amo-Chr19 5174605 5193245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0392 21 844 Receptor kinase-like Gene Family AT2G19210 44.587 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g0392 Malectin_like 1.5e-103 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0392 - - minc:123206351 1449.49