Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0391 ATGCATGCAATGGCAAAGAAGATCGCAAATTCTCTTTTTCTATTGCTTGGAGCTCTTTCTTTCATAGCAATGGTCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGATTGTGGGCTACCTGAAAATTCCAATTACACTGAAAAGAACATAGGAATCAACTACATTTCAGATGCTAATTTCATTGATTCTGGTGTGAGTAAAACTGTGTCACCCCAAGATAAGACTACTCATCCACAATATTTTAATTACCTTCGGAGTTTTCCTAATGGAATAAGAAATTGTTACCGCATAAATGTAACAAGTGTTACTAGATATTTAATCAGAGCTAGTTTTTTGTATGGAAACTATGATGGTCTTAATAAGCTTCCAGAGTTTGATCTTTATCTTGGAGTTCATTTTTGGGAGACGGTAAAATTCACAAATTCCTCAGTCAGCATAAACTATGAGATCATCCACACTCTATCGCTGAATTACATCCATATCTGTTTGGTTAACAAAGGCACAGGGACACCATTCATTTCAGTTATAGAAATGAGGATTTTGGGCAATGTCGAGAAGAGTTATGTCACTATAGAGTCATCTACATCATTGGCACGATTCCGAAGGTTGTATTTTAGTTCTATCAGCAACTTAATTTACAGGTATGAAGATGATCCTTATAACCGGATATGGGAGCCTTATTGGGAGAACAACTGGAGACTAATAAGCAGCAACCATAGCAATTATGCCCTTGATCAGGATCCCTTTAATCCACCAGCAGTTGTGTTGAAGACTGCAGCCACATCAATAAATGCTACTGCCTCATTAGATTTCCATTGGGACATTGATGACAATGAAACTCAGCACCAATACTATTTCTATCTACACTTCACAGAGCTTCAGCATTTGGGTGCAGATCAAACAAGATCATTCAATATCAACATGGATGGTAAGACTTGGAATACAGCTGAATCACTCAAATACGGCAAAGTATACACCAAACATGTTAGAGGACTTTCCTCTGGATGCAAAAAGTGTCACATTTCACTTATTCGGACAGAATCTTCTACCCTTCCACCCATTATCAGTGCTCTTGAGATTTATTTAGCAAAAAATTTTTCATCACAGTCAGAAATCGACAAAGACGACGGGTGGACAGTAGAAACTGGCAAGGAGATCCATGTCTTCCCAGATGCATACAAATGGCAAGGTGTAGACTGTAGCACTATTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCACCGGACATATACGGACTGATATCTCCAAGCTTACTATGTTAAAAGATTTGTCAGACAATGGTTTAAGTGGGAATATACCTAATTTTTTGGTGCAACTGCAATCACTAGAATACTTGATCTATGTCATATTTGCCTTCTGCTTTTGCAGAAACTTAGCACACAACAACCTTACAGCAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCAATTAACCTTGAGTGTGAGGCAAAATCCTAATCTTCTATGTGGAACAACTTCATGCACCCTGCAAACAAATGCTACAAGAAAGAAAAAGAATAATGCAGTTATTACAGTGGTAGCATCAATTGCAGGGATATTGCTGCTTCTAGGGATTGCAGCAGTTATAATCGTTCGTCGAAAAAAGACCTATGATGCTGCTAAGAACATTATGCTTGGGTGGCGTCATAATCCAATTAAGGAGTCAGAATTGGAAAATAAGCAACGAGAGTATTCATTTAATGAGGTGGTTAATATGACCAACAATTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAGGACATTGAAGTGGCTGTTAAACTTCTAATGAGGGTGCATCACCGAAATCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACTAACATAGGACTCATTTATGAATACATGAAAAATGGAGATTTAGATGAACATCTTTCAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTCGCTGATTTTGGATTATCCAAATGTTTTGCGGCTGAGGGCGATACACATGTGTCAACCATTGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAACAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATTACAGGTCAATCGGTGATAATAATAAAGAAAGACACGACTCATCATATAATTGAACGGGTTAATTCTATGATTGCTGAAGGGGACATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTTCCACTTCAGTGAAAAGGCCATACATGAGAGATGTAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACATAATATTTGTAACCTTCAAAATGAAGATTCAGTTGAAGAGTTCAGTGTGAATTTAATTAGTACTGATATGACTCCATCAGCTAGATAG 2586 0.3782 MHAMAKKIANSLFLLLGALSFIAMVQGQDQSGFISIDCGLPENSNYTEKNIGINYISDANFIDSGVSKTVSPQDKTTHPQYFNYLRSFPNGIRNCYRINVTSVTRYLIRASFLYGNYDGLNKLPEFDLYLGVHFWETVKFTNSSVSINYEIIHTLSLNYIHICLVNKGTGTPFISVIEMRILGNVEKSYVTIESSTSLARFRRLYFSSISNLIYRYEDDPYNRIWEPYWENNWRLISSNHSNYALDQDPFNPPAVVLKTAATSINATASLDFHWDIDDNETQHQYYFYLHFTELQHLGADQTRSFNINMDGKTWNTAESLKYGKVYTKHVRGLSSGCKKCHISLIRTESSTLPPIISALEIYLAKNFSSQSEIDKDDGWTVETGKEIHVFPDAYKWQGVDCSTIDGFLRITSLNLSSSGLTGHIRTDISKLTMLKDLSDNGLSGNIPNFLVQLQSLEYLIYVIFAFCFCRNLAHNNLTAGSVSNELLQKQSDGQLTLSVRQNPNLLCGTTSCTLQTNATRKKKNNAVITVVASIAGILLLLGIAAVIIVRRKKTYDAAKNIMLGWRHNPIKESELENKQREYSFNEVVNMTNNFDRILGRGGFGTVYHGFIEDIEVAVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMKNGDLDEHLSGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAEGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQSVIIIKKDTTHHIIERVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSSTSVKRPYMRDVVTQLKDCLAAELARKHNICNLQNEDSVEEFSVNLISTDMTPSAR* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0391 861 Gene3D Phosphorylase Kinase; domain 1 574 620 - -
Amo19g0391 861 Pfam Protein kinase domain 618 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0391 861 PANTHER OS07G0107800 PROTEIN-RELATED 19 861 - -
Amo19g0391 861 ProSitePatterns Protein kinases ATP-binding region signature. 598 619 IPR017441 GO:0005524
Amo19g0391 861 SMART serkin_6 592 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0391 861 PANTHER PUTATIVE-RELATED 19 861 - -
Amo19g0391 861 Gene3D Transferase(Phosphotransferase) domain 1 650 846 - -
Amo19g0391 861 Pfam Malectin-like domain 36 362 IPR024788 -
Amo19g0391 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Amo19g0391 861 Gene3D Phosphorylase Kinase; domain 1 621 649 - -
Amo19g0391 861 ProSiteProfiles Protein kinase domain profile. 592 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0391 861 SUPERFAMILY L domain-like 390 473 - -
Amo19g0391 861 SUPERFAMILY Protein kinase-like (PK-like) 573 821 IPR011009 -
Amo19g0391 861 Gene3D Ribonuclease Inhibitor 363 499 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0391 Amo-Chr19 5144878 5163896 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0391 2 861 Receptor kinase-like Gene Family AT1G51880 41.253 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g0391 Malectin_like 2.6e-100 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0391 - - ahf:112775583 1180.62