Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0387 ATGTCGTATTTCTATATTGGATTGAAGAGGATTAGAATGCTACGTAAATCATCCGACATGCCGAAGACGAAGAAAGTTGACTCACTCGAATACGGAAAAGTATCCACCAAACACGTCAGAGGACTTTCCTCTGGATGCAAAAAGTGTCACATTTCACTTATTCGGAATGAATTTTCCACCCTTCCACCCATTATCAGTGCTCTTGAGATTTATTTAGCAAAAGATTTTCCATCATCACAGTTAGAAACCCACAGAGATGACGCGGATGCAGTCACAAACATCAAGAGGATTTACAAAGTGGACAGTAGAAACTGGCAAGGAGATCCATGTGTTCCCAATGCATACAAGTGGGAAGGTGTAGACTGTAACTCTTACGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCTCCGGACATATACTGACTGATATCTCCAAGCTTACTATGTTAAAGTCCTTAGATTTATCAGACAATGGTTTAAGCGGGAATATACCTAATTTTTTGGCGCAACTGCAATCACTAGAATACTTAAACTTGGCAAAGAACAACCTCACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCGATTAACCTTGAGTGTGGGGCAAAATCCAAATCTTCTATGTGGAACAACTTCATGCACCCTGCAATCAAATGCTACAAGAAAGAAAAAGAATAATGCAGTAATTACAGTGGTAGCATCAATTGCAGGGATATTGCTGCTTCTAGGGATTGCAGCAGTTATAATCGTTCGCCGAAGAAAGACCTATGATGCTGCTAAGAACATTATGCTTGGGAGGCGTCATAATCCAATTAAGGAGTCAGAATTGGAAAATAAGCAACGAGAGTATTCATTTAATGAGGTGGTTAATATGACCAACAATTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAGGACATTGAAGTGGCTGTTAAGATGCTTTCATTATCATCAGTTAAGCTTCTAATGAGGGTGCATCACCGAAATCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACTAATATAGGACTCATTTATGAATACATGAAAAATGGAGATTTAGATGAACATCTTTCAGGAAAAAACAATAGGGGAAAGTCTTTGAACTGGGAAGATAGACTTCGAATAGCAGTAGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTCGCTGATTTTGGATTATCCAAATGCTTTGCGGCTGAGGGCGATACACATGTGTCAACCATTGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAACAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTTTTTTAAGGATAATTACAGGTCAACCGGTGATAATAATAAAGGAAGACACAACTCATCATATAATTCAACGAGTTAATTCTATGATTGCTGAAGGGGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTGCCACTTCAGTGCAAAGGCCATACATGAGAGATATAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACGGAAGATTGAAGAGTCAACACTAAATCACTAA 1755 0.3892 MSYFYIGLKRIRMLRKSSDMPKTKKVDSLEYGKVSTKHVRGLSSGCKKCHISLIRNEFSTLPPIISALEIYLAKDFPSSQLETHRDDADAVTNIKRIYKVDSRNWQGDPCVPNAYKWEGVDCNSYDGFLRITSLNLSSSGLSGHILTDISKLTMLKSLDLSDNGLSGNIPNFLAQLQSLEYLNLAKNNLTGSVSNELLQKQSDGRLTLSVGQNPNLLCGTTSCTLQSNATRKKKNNAVITVVASIAGILLLLGIAAVIIVRRRKTYDAAKNIMLGRRHNPIKESELENKQREYSFNEVVNMTNNFDRILGRGGFGTVYHGFIEDIEVAVKMLSLSSVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMKNGDLDEHLSGKNNRGKSLNWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAEGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVFLRIITGQPVIIIKEDTTHHIIQRVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSATSVQRPYMRDIVTQLKDCLAAELARKRKIEESTLNH* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0387 584 Gene3D Transferase(Phosphotransferase) domain 1 368 582 - -
Amo19g0387 584 PANTHER PUTATIVE-RELATED 42 576 - -
Amo19g0387 584 ProSitePatterns Protein kinases ATP-binding region signature. 309 330 IPR017441 GO:0005524
Amo19g0387 584 SMART serkin_6 303 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0387 584 Pfam Protein tyrosine and serine/threonine kinase 305 563 IPR001245 GO:0004672|GO:0006468
Amo19g0387 584 Gene3D Ribonuclease Inhibitor 88 209 IPR032675 -
Amo19g0387 584 SUPERFAMILY Protein kinase-like (PK-like) 279 563 IPR011009 -
Amo19g0387 584 ProSiteProfiles Protein kinase domain profile. 303 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0387 584 Gene3D Phosphorylase Kinase; domain 1 284 367 - -
Amo19g0387 584 SUPERFAMILY L domain-like 112 199 - -
Amo19g0387 584 PANTHER OS07G0107800 PROTEIN-RELATED 42 576 - -
Amo19g0387 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0387 Amo-Chr19 5075657 5080008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0387 49 573 Receptor kinase-like Gene Family AT1G51850 50.000 2.66e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g0387 PK_Tyr_Ser-Thr 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0387 - - adu:107464157 834.328