Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0380 ATGCATGCAATGGAAAAGATGTTCGCAAATTCTGTTTTTCTATTGCTTGGAGCTCTTTCTTTCATAGCAACGGTCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGATTGTGGGCTACCTGAAAATTCCAATTACACTGAAAAGAACACAGGAATCAATTACATTTCAGATGCTAATTTCATTGATTCTGGTGTGAGTAAAACTGTGTCACCCCAAGATAAGACCACTCATCCACAATATTTTAATTACCTTCGGAGTTTTCCTAATGGAATAAGAAATTGTTACAGAATAAATGTAACAAGTGTTACTAGATATTTAATCAGAGCTAGTTTTTTGTATGGAAACTATGATAGTCTTAATACGCTTCCAGAGTTTGATCTTTATCTTGGAGTTCATTTTTGGGAGACGGTAAAATTCACAAATTCTTCAGTCAGCATAAACTATGAGATCATCCACACTCTATCGCTGGATTATATCCATATCTGCTTGGTTAACAAAGGCACAGGGACACCATTCATTTCAGCTATAGAAATGAGGGTTTTGGACAATGTCGACTCTACTTATAGCACTATAGACTCATCTACACGATTGGCACGATTCCGAAGGTTGTATTTTAGTTCTATCACCAACTTAATATACAGGTATCAAGATGATCCTTATGACCGGATATGGGAGCCTTATTGGGACGACAAGTGGAGACTAATAAGCAGCAACCATAGCAATAATGCCCTTGATCAGGAAGCCTTTAATCCACCAGCAGTTGTGTTAGAGACTGCAGCCACATCAATAACTGCTACTGCCTCATTAGACTTCCATTGGGAGAATGATGACAATGAAACTCAGCACCAATACTATTTCTACCTGCACCTCATAGAGCTTCAGCAGTTGGGTCAAACAAGATCATTCAATATCAACATGGATGGTAAGACTTGGAATACAGCTGAATCACTCAAATACGGAAAAGTATACACCAAACATGTTAGAGGACTTTCCTCTGGATGCAAAAAGTGTCGCATTTCACTTATTCGGACAGAATCTTCTACCCTTCCACCCATTATCAGTGCTCTTGAGATTTATTTAGCGAAAAATTTCTCATCACAGTCAGAAACCGACAAAGACGACGCGGAGGCAGTCACAAACATTAAGAACGCTTATAGGGTGGAGAGTAGAAACTGGCAAGGAGATCCATGTCTTCCCAATGCATACAAATGGCAAGGTGTAGACTGTAGCACTATTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCACCGGACATATACTGACTGATATCTCCAAGCTTACTATGTTAAAGTCCTTAGATTTATCAGACAATGGTTTAAGTGGGAATATACCTAATTTTTTGGCGCAACTGCAATCACTAGAATACTTAAACTTAGCACACAACAACCTTACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCGATTAACCTTGAGTGTGGCGCAAAATCCAAATCTTCTATGTGGAACAACTTCATGCACCCTGCAAACAAATGCTACAAGAAAGAAAAAGAATAATGCAGTTATTACAGTGGTAGCATCAATTGCAGGGATATTGCTGCTTCTAGGGATTGCAGCAGTTATAATCTTTCGCCGAAGAAAGACATATGATGCTGCTAACAACGTTGTGCTTGGGAGGCGTCATAATCCAATTAAGGAGTCAGAATTGGAAACTAAGCAACGAGAGTATTCATTTAATGAGGTGGTTAAGATGACCAACAATTTTGATAGAATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAGGACATTGAAGTGGCTGTCAAGATGCTTTCGTTATCATCAGTGCAAGGATATCAACAATTTATTGCAGAGGTTAAGCTTAGAGTACATCATCGAAATCTGACTTCTCTTGTTGGTTATTGCAATGAAGAAACTAATATAGGACTCATCTATGAATACATGAAAAATGGAGATTTAGATAAAAATCTTTCAGGAAAAAACAATAGGGGAAGGTCTTTGAACTGGGAAGATAGACTTCGAATAGCAGTAGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTCGCTGATTTTGGATTATCCAAATGTTTTGCGGCTGAGAGCGATACACATGTGTCAACCAATGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAATAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATTACAGGTCAACCGGTGATAATAATAAAGGAAGACACAACTCATCATATAATTCAACGAGTTAATTCAATGATTGCTGAAGGGGATATAACAAAAGTTGTTGATTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTGCCACTTCAGTGCAAAGGCCATACATGAGAGATATAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACGTAATATTTGTGACCTTCAAAATGAAGATTTAGTTGAACAGTTCAGTGTGAATTTAATTAGTACTGATATGACTCCATCAGCTAGATAG 2700 0.383 MHAMEKMFANSVFLLLGALSFIATVQGQDQSGFISIDCGLPENSNYTEKNTGINYISDANFIDSGVSKTVSPQDKTTHPQYFNYLRSFPNGIRNCYRINVTSVTRYLIRASFLYGNYDSLNTLPEFDLYLGVHFWETVKFTNSSVSINYEIIHTLSLDYIHICLVNKGTGTPFISAIEMRVLDNVDSTYSTIDSSTRLARFRRLYFSSITNLIYRYQDDPYDRIWEPYWDDKWRLISSNHSNNALDQEAFNPPAVVLETAATSITATASLDFHWENDDNETQHQYYFYLHLIELQQLGQTRSFNINMDGKTWNTAESLKYGKVYTKHVRGLSSGCKKCRISLIRTESSTLPPIISALEIYLAKNFSSQSETDKDDAEAVTNIKNAYRVESRNWQGDPCLPNAYKWQGVDCSTIDGFLRITSLNLSSSGLTGHILTDISKLTMLKSLDLSDNGLSGNIPNFLAQLQSLEYLNLAHNNLTGSVSNELLQKQSDGRLTLSVAQNPNLLCGTTSCTLQTNATRKKKNNAVITVVASIAGILLLLGIAAVIIFRRRKTYDAANNVVLGRRHNPIKESELETKQREYSFNEVVKMTNNFDRILGRGGFGTVYHGFIEDIEVAVKMLSLSSVQGYQQFIAEVKLRVHHRNLTSLVGYCNEETNIGLIYEYMKNGDLDKNLSGKNNRGRSLNWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAESDTHVSTNVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIIKEDTTHHIIQRVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSATSVQRPYMRDIVTQLKDCLAAELARKRNICDLQNEDLVEQFSVNLISTDMTPSAR* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0380 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Amo19g0380 899 Gene3D Transferase(Phosphotransferase) domain 1 664 883 - -
Amo19g0380 899 Gene3D Ribonuclease Inhibitor 375 498 IPR032675 -
Amo19g0380 899 ProSiteProfiles Protein kinase domain profile. 591 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0380 899 Pfam Malectin-like domain 36 360 IPR024788 -
Amo19g0380 899 Gene3D Phosphorylase Kinase; domain 1 578 663 - -
Amo19g0380 899 ProSiteProfiles Leucine-rich repeat profile. 466 488 IPR001611 GO:0005515
Amo19g0380 899 PANTHER OS07G0107800 PROTEIN-RELATED 19 899 - -
Amo19g0380 899 Pfam Protein tyrosine and serine/threonine kinase 593 859 IPR001245 GO:0004672|GO:0006468
Amo19g0380 899 SUPERFAMILY Protein kinase-like (PK-like) 567 859 IPR011009 -
Amo19g0380 899 ProSitePatterns Protein kinases ATP-binding region signature. 597 618 IPR017441 GO:0005524
Amo19g0380 899 PANTHER PUTATIVE-RELATED 19 899 - -
Amo19g0380 899 SUPERFAMILY L domain-like 375 487 - -
Amo19g0380 899 SMART serkin_6 591 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0380 Amo-Chr19 5002259 5008455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0380 7 899 Receptor kinase-like Gene Family AT1G51800 46.171 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g0380 Malectin_like 7.9e-99 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0380 - - ahf:112775583 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0380 19 5002259 5008455 Amo09g0317 09 3734817 3740452 hybridization
Amo19g0380 19 5002259 5008455 Amo09g0316 09 3725922 3730851 hybridization
Amo18g0247 18 3553118 3560545 Amo19g0380 19 5002259 5008455 PCT