Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0378 ATGGGTAGAAAAATTGTTCAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGGCACTTGGGGGTTTATTGCGCAGTAAGTATAATGAAGGAGATTGGGAGAATGTACTTGATAGTAAAATTTGGGAACTCTCGGAAGATGTCAGTCCTGCATTAAGAGTTAGTTATCATTACCTTCCTTCACATTTAAAGCGGTGTTTTGTTTATTGCTCAATATTTCCGGAGGATTATGAATTTGACAAAGACAAATTAATTTTGTTATGGATGGCTGAAGACCTTTTACAACCAAAGGAAAACAACGGATTAGAAAATGTTGGTTGTGCATATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCCTCCAATACTAATGAAAAGTTATTTGTAATGCATGATCTTATGCATGATCTAGCAACGTTTTTTGCTGGAAAATTCTATTTCAAAGGCAAAGAATTTTGCAATCAACACATGATAGACAACAAAACTCGTCATTTGTCATATGCTACAAAATTTGTGGTTAGCATCAAATTATTTCGAGAGGCCAATAATGGAGCAGGACACCTGAGAACATTTTTAGATTTTACTTTGCTTCGCCGTGATCAATCAATTGATATTGAAAGCTATTCTTGGCTCTTAAAACAACAATTAGGGTGTTTAAGAGTTTTGTCATTTAAACGCTCGTTTATAGAGTCATTGCCTGATTCAATAGGTGAATTGATTCTTTTGCGTTACTTGAATCTCTCTTACGCACCTATTGTGACATTGCCCGAGTCAATATGTAAATTATACAATCTCCAAACTTTGAGGTTAAAGAATTGTGCTCGGTTAGAGATGCTTCCCAGCCGCATGGAAGATCTTGTGAACCTGCGTCACCTTGATATTCGAGGAGCTTCTTGTCTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAGCATCTAAACTTCTTAAGTGATTATATTGTCGGCGAGCATGAAGAAAATGGGATAAGAGAACTGGGAACACTGGACAATCTCCATGGCTCATTTTGCATTTCCAAGTTGGAGAATGTCAAGAATAGCGGTGAAGTTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACACTTTAGAATTGAATTGGCTTCCAGATGGTGACATTGATGATGTTCAAACTGAAGAGATATACTTGACAAGTTACAACCTCATCAAAACTTGA 1197 0.3693 MGRKIVQKCKGLPLAVKALGGLLRSKYNEGDWENVLDSKIWELSEDVSPALRVSYHYLPSHLKRCFVYCSIFPEDYEFDKDKLILLWMAEDLLQPKENNGLENVGCAYFDELVARSFFQPSNTNEKLFVMHDLMHDLATFFAGKFYFKGKEFCNQHMIDNKTRHLSYATKFVVSIKLFREANNGAGHLRTFLDFTLLRRDQSIDIESYSWLLKQQLGCLRVLSFKRSFIESLPDSIGELILLRYLNLSYAPIVTLPESICKLYNLQTLRLKNCARLEMLPSRMEDLVNLRHLDIRGASCLKEMPKGMSKLKHLNFLSDYIVGEHEENGIRELGTLDNLHGSFCISKLENVKNSGEVLEAKMGNKKHINTLELNWLPDGDIDDVQTEEIYLTSYNLIKT* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0378 398 Gene3D - 54 139 IPR036388 -
Amo19g0378 398 Gene3D - 1 53 IPR042197 -
Amo19g0378 398 PRINTS Disease resistance protein signature 260 276 - -
Amo19g0378 398 PRINTS Disease resistance protein signature 9 23 - -
Amo19g0378 398 SUPERFAMILY L domain-like 129 374 - -
Amo19g0378 398 PANTHER DISEASE RESISTANCE PROTEIN RP 2 382 IPR044974 GO:0006952
Amo19g0378 398 Gene3D Ribonuclease Inhibitor 194 393 IPR032675 -
Amo19g0378 398 Pfam NB-ARC domain 1 64 IPR002182 GO:0043531
Amo19g0378 398 PANTHER OS05G0414200 PROTEIN 2 382 - -
Amo19g0378 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 69 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0378 Amo-Chr19 4987827 4989023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0378 227 316 WRKY Transcription Factor Family AT4G12020 37.363 5.92e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0378 - - ahf:112708719 701.049