Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0373 ATGTACTCTGAAAATCTGATAGTGTCCGCTGAAAACCCTAGACCCTTCGCGTTTCAGCAACATCTGTCTTCTTCTTCGTCTACTACTAATTCGGCCAACGCGAAACCCATGAGCAATGAGATCGCACAGATGCCTCCCCCTTCCACTCTCGGTTGCAGGTTCAATGCTATGCTCAAGCTGCGCGACGACGAGCTCAGGGCCACCGCCGCTCACGTGCCCCCTCCGTCTACGGAAGAAATCGTTCAGCTGTACGAGATGCTGCTGTCAGAGCTCACGTCCAATCAGAAGCTCATTATCAACGATCTCACCTTCATCGCTGTGCACCAGAGGGAGCATGCCAGGGGCATCGCCGACGCTATCTGCGCTCGGATTCTCAAGGTGCCTGCAGAGCAAAAGCTTCCTTCACTCTATCTCTTGGACAGTATAGTGAAGAACTTTGGAGAGGAATATGTTGGATACTTTGCATTACGCCTGCCCGAAGTTTTCTGTGAGGCATACAGGCAGGTTCAGCCTTATTTGCACCCTGCTATGCGCCATCTCTTTGGCACCTGGTCAGAAGTCTTTCCACCGTCTGCCTTACGCAAGATTGAAGCTGAGTTGCAACTTTCTCAAGTAGTTAATAATAGTCAATCGTCCAACATGAATCCCCTCAGAGCATCTGAATCTCCTAGTCCAAGTCATGGCATACATGTAAATCCAAAGTACCTGCAGCAGTTGGAGCGCTCAACTGTGGATAGTACAAGTGGGAAAAAATGGTGTGGCTTATTCGTCGGGGATGATTGTGTGCAAGAGGAGCTGCTTGAAAAAGCTGTTCCAGGAGATGATGATGGTGAAAGGAAAATGAACTTTGCATGGCGGGTGGACAAGATGGAAGCAGACATTAGAAATCTGAAATTCATGACTCAAGTTCTTGGGTTTGGGTTGTTGGTAGTTGTAGTTTTTGTAGGAATGGTGCTCTTAAAGAGTTGA 969 0.484 MYSENLIVSAENPRPFAFQQHLSSSSSTTNSANAKPMSNEIAQMPPPSTLGCRFNAMLKLRDDELRATAAHVPPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQREHARGIADAICARILKVPAEQKLPSLYLLDSIVKNFGEEYVGYFALRLPEVFCEAYRQVQPYLHPAMRHLFGTWSEVFPPSALRKIEAELQLSQVVNNSQSSNMNPLRASESPSPSHGIHVNPKYLQQLERSTVDSTSGKKWCGLFVGDDCVQEELLEKAVPGDDDGERKMNFAWRVDKMEADIRNLKFMTQVLGFGLLVVVVFVGMVLLKS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0373 322 MobiDBLite consensus disorder prediction 20 46 - -
Amo19g0373 322 SUPERFAMILY ENTH/VHS domain 75 200 IPR008942 -
Amo19g0373 322 CDD CID_Pcf11 81 200 - -
Amo19g0373 322 ProSiteProfiles CID domain profile. 76 204 IPR006569 -
Amo19g0373 322 Gene3D - 73 203 IPR008942 -
Amo19g0373 322 SMART 558neu5 79 201 IPR006569 -
Amo19g0373 322 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 48 246 - -
Amo19g0373 322 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 48 246 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Amo19g0373 322 Pfam CID domain 86 194 IPR006569 -
Amo19g0373 322 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0373 Amo-Chr19 4928112 4930625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0373 28 247 C2H2 Transcription Factor Family AT4G04885 58.824 3.19e-73 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0373 K14400 - gmx:100787354 332.413