Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0365 ATGAGGGTTCATCATAGGAATCTAACTTCCCTCATTGGATATTGCAACGAAGAAACCAACATAGCACTCATCTATGAATATATGGAAAATGGCAACTTAGAAGAACATCTTTTGGAGAAAAATAGCAGGACAARGTTGTTCAATTGGGAAGAAAGGCTCACTATAGCTATGGATGCAGCCCAAGGACTTGAGTATCTACATAACGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAATGTACAAACATTTTACTAAATGAAAATTTCCAAGCGAAAATGTCTGACTTAGGTTTGTCCAGAAGCATTCCAGTTGACGGCGGCACACATGTAACAACTGTCATTGCAGGGACTCCTGGTTACTTGGATCCAGAGTACCAAGTATCAAATAGGCTAACAGAGAAAAGTGACGTTTATAGTTTTGGGGTAGTTTTATTGGAGATAATCACAGGTAAACCAGCAATACTTAAAGCGGTTGAGGGGAAAATTCACATAAGTGAGTGGGTTAAATCTATGCTTGCAAAAGGTGATGTAAAATGTATTGTTGATACAAGATTACAAGGAGATTTTGAGAGTAGTTCTGTTTGGAGAGCTGTTGAAATAGCAATGGCTTCTGTGTCCAATAAGTCCTCCAAAAGACCATACATGACTGATATTGTGACCGAGCTAAAGGAATGTTTGGCTATGGAGTTGGCTCGAAAACTTAACAGTTGCGAAACCATGACTATGAATTTGGCTACAGAGTCAGAAAGCAGCTCCTTGGCTAGTTCCATAATGATGTGTAAAACAGAAATGGCTGGATCTTAA 807 0.3903 MRVHHRNLTSLIGYCNEETNIALIYEYMENGNLEEHLLEKNSRTXLFNWEERLTIAMDAAQGLEYLHNGCKPPIIHRDVKCTNILLNENFQAKMSDLGLSRSIPVDGGTHVTTVIAGTPGYLDPEYQVSNRLTEKSDVYSFGVVLLEIITGKPAILKAVEGKIHISEWVKSMLAKGDVKCIVDTRLQGDFESSSVWRAVEIAMASVSNKSSKRPYMTDIVTELKECLAMELARKLNSCETMTMNLATESESSSLASSIMMCKTEMAGS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0365 268 PANTHER OS07G0107800 PROTEIN-RELATED 1 235 - -
Amo19g0365 268 ProSiteProfiles Protein kinase domain profile. 1 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0365 268 Pfam Protein tyrosine and serine/threonine kinase 2 223 IPR001245 GO:0004672|GO:0006468
Amo19g0365 268 SUPERFAMILY Protein kinase-like (PK-like) 2 223 IPR011009 -
Amo19g0365 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Amo19g0365 268 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0365 268 Gene3D Transferase(Phosphotransferase) domain 1 29 250 - -
Amo19g0365 268 Gene3D Phosphorylase Kinase; domain 1 1 28 - -
Amo19g0365 268 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0365 Amo-Chr19 4851912 4853103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0365 1 255 Receptor kinase-like Gene Family AT1G51890 56.923 6.42e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g0365 PK_Tyr_Ser-Thr 8.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0365 - - ahf:112712814 502.286