Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0359 ATGGGTAACAAGAAGYACATCAACACTTTAAAATTSAAATGGCTTCCAAATGGTGACAATGATGACGTTGAAACCGAAAGAGATATTCTTGACAAGTTACAACCTCATCAAAACTTGAAAGAGTTATCAATTAAGGGTTATCCGGGTGAAAGATTCCCAGATTGGTTAGGCCTTTCTTGCTACTCCAATATGACCAAATTGAGTCTGGATAGTTGTATAAATTGTTGTGAGCTTCCTTCACTGGGACAGTTACCCTCTTTACAGCATCTGGAGATTTCTAAACTTGATGGGTTGGAGAAAATTGATTCTGAGTTCTACAACAAAAACAATGCATCATTTCAGGAGATGACACCCTTCAAATCTCTTGAAACTCTGAAAATTGAGTATATGTATCGTTGGCGGGAGTGGCATTTTCCTGATGAGTTTGATGGTTTTCCTGAGCTTAGAATCCTTGAAATAAGAAGCTGTCCGGTGTTAAGAGGAGATCTGCCTGCTCACCTTCCGGCTCTGGAGGAACTTATGATTGTTGAATGTGAAGAGCTTGCATGTTCGCTGCCAAGGGCTCCCAAGCTTCACGAATTACATGTGCTGAATTCTGGTTTTTATACAGATGCGACCACGCACAATGTAGACATCACAGGAACCCAGCTGGCGAAGTCCGTATTGGAGTGGCTGCCACACATCCAACCACCACGCGTCCAACATCTGTTTATCAAGCACTGTTGTTCAGCCATATCAATTTCAGCAGATTATGTGCCTGCTTCGTTACAATATCTTGTCATCTGTGATTGTCCAAAATTAACATTCTCAGAGCAACTGCACCACAAGTCACTAACGGAGATAGATGTGTATGATTGTGATTCACTGACGTTGTTTCCATTGGGGGCCCTTCCAAATCTCAAGAAACTCGCAATCCGTGGATGCAAAAAGATCGAATATGTTGAGATGCCACAGACTCTTCCAAGTCTGTGTTATATATGGATCACAGAATGTCCCGGTTTAGTATCCCTGCCGGCTCTAGCGTTGGCTGCTCCCCACCTACAGGAGCTGTATATACGCAATTGCCCAGAAATCGATTGTTTTGCTGGGGAGTGCCTCCCGCCGAGTCTGAAAACTCTTGAAGTCATTAAGTGCCAGAAACTAGAGAGGTGGATAACATCAAAGGGTTTGCAGAGTCAAGGCCTTACCCGTCTAATCCTTCACGAATGGAATGAAGTTAAGTCGTTCCCAGGAGAGGGTTCACTTCCTGCTTCTCTTGTGTGTCTAAAATTGTCTACATTCTCAAATCTGGAGACGCTTGATTGCAAGGGGCTTCACCATCTTACCTCCCTCAAAAATTTAGCAATTGGTAACTGTAGAAAGCTTGAGAATATCACAGAAGAACATTTGCTTGCCTCCATAGAAAATATCTACTTAGGGGAAGAATGTCCTTTGAGGCAGAAGCTGTCTTCAATACTTAAAGATGACTCCGTCCTCGAAGGAAACGAATCTGCCCTGGAGTTGCTTGGAAGTGACAAGAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTGTATGTGGCTGATGACTTGCTTGATGAACTCTCCACTAAAGCTGCTACTGCCAATCCAAGGGATCCAGGTAACTCTTCCTTCTGGTCTCGCGCTGTTGATTCATGTATTGAAGATAGTGGTSTCAATGTCATCGAAAAAATAGTTGGCACACTAGAGTCTGTTGTAGGACGAAAAGGTAAACTTGGTCTGAAAGAGAGTGCCAAGTTGGACACATCATGGAGAATCCCATCAACATCTCTTGTTGTAAGTTCTGACRTATTTGGTCGGGACSAAGACAAGGAGAACATAATCAAATTGCTGTTAGATGATACCTGCGATGCTGGATCACGTGTGACTGTGATCCCCATCGTGGGAATGGGCGGAATAGGAAAAACTACTTTRGCTCAACTTGTTTACAATGATGCCAAAGTCGTGGAAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAATTCTGACCCTGTTAATGTTACAAGGATAGTAATAGGGGCAATAGATTCTTCTCCCTGTACCATGGATAATTTTGATTTACTTCAGACTAATTTGAAAAAAAAGTTGACAGAAAAGACATTCTTAGTTGTTTTAGATGATATCTGGGATGATCGACGAGACATGTGGGAGGATTTTCTGAAACCTTTTCATAATGGGAATAATAAAAGTAAGATTCTCCTAACAACCCGTAATGAAAATGTTGCTTCTGCATTTGCTGCTAATAATCTACATTATCGACTGAGTTTATTGTCGAAGGAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCTATTTCTACTCATCTTAAACAATATGCAACTCTGGAAGCAATTGGTAGAAAAATTGTTGAAAAATGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGTAATAAGGATAATAAAGGAGATTGGGAGAATATACTTGAAAGTGAGATTTGGGAACTCGCAGAAGATAATAGTAAGATTGTTCCCGCATTAAGAGTTAGTTATCATTACCTCCCTTCACATTTAAAGCGGTGTTTTGTTTATTGCTCATTATATCCCGAGGATTATCAATTTGACAAAAGCCAATTAATTTTGTTATGGATGGGTGAAGATCTTTTACGACCAAAGAAAAACAATACATTAGAAAATATTGGTTGTGCATATTTTGATGAGTTAGTTGCAAGGTCATTTTTTCAACCCTCCAATACTAATAATAAGTTATTTGTAATGCACGACCTCATGCATGATTTAGCAACATTTTTTGCTGGAAATTTTTTTTTCAAATTCAAAGAATTTGGCAGTCCATACATGATGGACAATAAAACCCGTCATTTGTCATGTGCTGCAAAATATGAGGATAGCATCAAATTATTTCGAGAGGGCTATAATGGAGCAGTATGCACGAGAACATTTTTAGATTTTTCTGTGCTTCCCTATTTTCAATCACGTGATATTGAAGGGCATCCTAGGCTTTTACGACAACAATTGAGAGTTTTGTCATTAACTATAAAGTCAATGCCTGATTCAATAGGTGAATTGATTCATTTGCGTTATTTGAATCTTTCTAAGTCACCTGTTGTGGCATTGTCCGAGTCAATATGTGAATTATACAATCTCCAAACTTTGTTGTTGAGGAACTGTTATGAGCTAGAGATGCTTCCCAGTCGCATGCAAGATCTTGTGAACCTGCGCCACCTTGATATTCGAGGTGCTTGTTGTTTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAGAATCTACAGTTCTTAAGTGATTATATTGTCGGCAAGCATGAAGAGAATGGGGTAGCTGAATTGGGAACACTGGACAATCTTCATGGCTCCTTTTGCATTTTCAAATTGCAGAATGTCAAGAATAGTGGTGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACACTTTAGAATTGTATTGGCCTCCAGATGGTGACATTGATGATGTTCAGACTGAAAGAGATATACTTGACAAGTTACAACCTCATCAAAACTTGAAAGAGTTATCAATTCATGGTTACCGGGGTGAAACATTTCCAGATTGGTTAGGCCTTTCTGGCTACTCCAATATGACCAAATTGATTCTATTTCGTTGTATGAATTGTTGTGAGTTTCCTGTACTGGGACAGTTACCCTCTTTACAGCATCTGGAGGTTTATGAACTTCGTGGACTGGAGAAAATTGATTTTGAGATCTACAACAAAAACAATGCATCCTTACAGCCGGAGACACCATTCAAATCTCTTGAAACTCTGAAAATACATGATATGTGTGGTTGGCGGGAGTGGCATATTCCTGATGAGTTTGATGGTTTTCCTGAGCTTAGAGTCCTTGAAATAACAAACTGTGGGGTGTTAAGAGGAGATCTGCCTGCTCATCACCTTCCGGCTCTGGAGGAACTTACCATTGCTGATTGTGAAGAGYTYGCATGTTCGCTGCCGAGGGCCCCCAAGCTTCACCAGCTTAACGTACGTAACCGTTTTTCAAAATCAAAGGTGAGTACGGGACCGCACAAGGTAGTGATTTCRAAAACCCAGCTGGCGAAGTCCGCATTGGAGTGCCTGTCCCACATCCAGTCGCCACGTGTCCAATATCTGGATATCAGAGGCTGTGAGTCAGCCTTATCAATTTCAGCAGACTGTGTGCCCGCTTCATTACAGTATCTGCAGATCCAGGACTGTTCAAAATTAACATTTTCAGAGCAACTGCAACACAAGTCGCTAACGGAGATATCTATACAGTGGTGTCATTCACTGACGTCRTTTTCATTGGGGGCCCTTCCAAATCTCCAGAAACTCACAATCCGTGATTGCCTAAACATGGAATATGTTGAGGTGCCACAGGCTCTTCCAAGTCTCCGTTATGTATGGATCTCAAACTGCCGTAGTTTAGTATCCTTGCCGGCGCTAGGGTTGGTTGCGCCCCACCTAGAGGAGCTAAAGATCMAMGATTGCTCAGAAATCGATTGTTTTGCTGGGAAGTTCCTCCCGCCGAGTTTAAAAAAACTTGAAGTYTGTRGSTGCGAGAAACTAGCGAGTTGGATAACATCAAATGGTTTGCAGAGTGAAGGCCTTACCTATCTTCTCCTTGAGAATTGGAATGAAGTTAAGTCATTCCCAAGTGAARGYCTCCTTCCTGCTTCTCTCGAGTCTCTAAGACTSCGGYGCTTTCCAGATCTGGAGACRCTTGACTGCAWGGGGCTTCGCCRTCTTACCTCCCTACAACATTTAGTAATTAGCTGCAGTGAAAAGCTTGAGAATATCACAGAAGAACATGTGCTTGCCTCCATAGAAAAAATCTACATAGGGAGAGAAAGTCCTTTGAGGCTTAAGCTGCAAGAGATGGAAGACCTACAGATTAATTTCGGTAAGTGTTCTTGCTCTGATCTACCGTAA 4968 0.4128 MGNKKXINTLKXKWLPNGDNDDVETERDILDKLQPHQNLKELSIKGYPGERFPDWLGLSCYSNMTKLSLDSCINCCELPSLGQLPSLQHLEISKLDGLEKIDSEFYNKNNASFQEMTPFKSLETLKIEYMYRWREWHFPDEFDGFPELRILEIRSCPVLRGDLPAHLPALEELMIVECEELACSLPRAPKLHELHVLNSGFYTDATTHNVDITGTQLAKSVLEWLPHIQPPRVQHLFIKHCCSAISISADYVPASLQYLVICDCPKLTFSEQLHHKSLTEIDVYDCDSLTLFPLGALPNLKKLAIRGCKKIEYVEMPQTLPSLCYIWITECPGLVSLPALALAAPHLQELYIRNCPEIDCFAGECLPPSLKTLEVIKCQKLERWITSKGLQSQGLTRLILHEWNEVKSFPGEGSLPASLVCLKLSTFSNLETLDCKGLHHLTSLKNLAIGNCRKLENITEEHLLASIENIYLGEECPLRQKLSSILKDDSVLEGNESALELLGSDKRVKKWLVDLQDALYVADDLLDELSTKAATANPRDPGNSSFWSRAVDSCIEDSGXNVIEKIVGTLESVVGRKGKLGLKESAKLDTSWRIPSTSLVVSSDXFGRDXDKENIIKLLLDDTCDAGSRVTVIPIVGMGGIGKTTLAQLVYNDAKVVEKFDTRAWVCVAENSDPVNVTRIVIGAIDSSPCTMDNFDLLQTNLKKKLTEKTFLVVLDDIWDDRRDMWEDFLKPFHNGNNKSKILLTTRNENVASAFAANNLHYRLSLLSKEDCWSVFLKHSSISTHLKQYATLEAIGRKIVEKCKGLPLAVKTLGGLLRNKDNKGDWENILESEIWELAEDNSKIVPALRVSYHYLPSHLKRCFVYCSLYPEDYQFDKSQLILLWMGEDLLRPKKNNTLENIGCAYFDELVARSFFQPSNTNNKLFVMHDLMHDLATFFAGNFFFKFKEFGSPYMMDNKTRHLSCAAKYEDSIKLFREGYNGAVCTRTFLDFSVLPYFQSRDIEGHPRLLRQQLRVLSLTIKSMPDSIGELIHLRYLNLSKSPVVALSESICELYNLQTLLLRNCYELEMLPSRMQDLVNLRHLDIRGACCLKEMPKGMSKLKNLQFLSDYIVGKHEENGVAELGTLDNLHGSFCIFKLQNVKNSGEALEAKMGNKKHINTLELYWPPDGDIDDVQTERDILDKLQPHQNLKELSIHGYRGETFPDWLGLSGYSNMTKLILFRCMNCCEFPVLGQLPSLQHLEVYELRGLEKIDFEIYNKNNASLQPETPFKSLETLKIHDMCGWREWHIPDEFDGFPELRVLEITNCGVLRGDLPAHHLPALEELTIADCEEXACSLPRAPKLHQLNVRNRFSKSKVSTGPHKVVISKTQLAKSALECLSHIQSPRVQYLDIRGCESALSISADCVPASLQYLQIQDCSKLTFSEQLQHKSLTEISIQWCHSLTSFSLGALPNLQKLTIRDCLNMEYVEVPQALPSLRYVWISNCRSLVSLPALGLVAPHLEELKIXDCSEIDCFAGKFLPPSLKKLEVCXCEKLASWITSNGLQSEGLTYLLLENWNEVKSFPSEXLLPASLESLRLRXFPDLETLDCXGLRXLTSLQHLVISCSEKLENITEEHVLASIEKIYIGRESPLRLKLQEMEDLQINFGKCSCSDLP* 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0359 1655 Gene3D - 590 759 IPR027417 -
Amo19g0359 1655 Gene3D - 851 936 IPR036388 -
Amo19g0359 1655 PANTHER OS05G0414200 PROTEIN 3 206 - -
Amo19g0359 1655 PANTHER DISEASE RESISTANCE PROTEIN RP 3 206 IPR044974 GO:0006952
Amo19g0359 1655 PRINTS Disease resistance protein signature 803 817 - -
Amo19g0359 1655 PRINTS Disease resistance protein signature 705 719 - -
Amo19g0359 1655 PRINTS Disease resistance protein signature 1294 1310 - -
Amo19g0359 1655 PRINTS Disease resistance protein signature 632 647 - -
Amo19g0359 1655 PANTHER OS05G0414200 PROTEIN 503 1321 - -
Amo19g0359 1655 PANTHER OS05G0414200 PROTEIN 252 457 - -
Amo19g0359 1655 Pfam NB-ARC domain 610 832 IPR002182 GO:0043531
Amo19g0359 1655 Gene3D - 766 850 IPR042197 -
Amo19g0359 1655 Gene3D Ribonuclease Inhibitor 1007 1363 IPR032675 -
Amo19g0359 1655 Gene3D Ribonuclease Inhibitor 209 388 IPR032675 -
Amo19g0359 1655 Gene3D Ribonuclease Inhibitor 8 199 IPR032675 -
Amo19g0359 1655 Gene3D Ribonuclease Inhibitor 1364 1649 IPR032675 -
Amo19g0359 1655 SUPERFAMILY L domain-like 926 1333 - -
Amo19g0359 1655 PANTHER DISEASE RESISTANCE PROTEIN RP 503 1321 IPR044974 GO:0006952
Amo19g0359 1655 PANTHER DISEASE RESISTANCE PROTEIN RP 252 457 IPR044974 GO:0006952
Amo19g0359 1655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 592 866 IPR027417 -
Amo19g0359 1655 SUPERFAMILY RNI-like 1283 1615 - -
Amo19g0359 1655 SUPERFAMILY L domain-like 30 265 - -
Amo19g0359 1655 SUPERFAMILY L domain-like 231 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0359 Amo-Chr19 4769803 4780616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0359 630 935 WRKY Transcription Factor Family AT5G45050 23.975 3.72e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0359 - - ahf:112708719 1578.92