Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0357 ATGGCTGCAAAACTTGAGGGTCGAGCTTATCTCTCTTCTTTTGTTGATGCTGTTTCAAAGAAGCTGTCTTCAATACTTGAAGATGACTTTGTACTCGAAAGAAACGACTCTGAGCTGAAGTTGCTTGAAAGGTTGGATGATTGTCTGTGTGATGTTGGACCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCAGTGACGAGAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTTCTCGATGAACTCTCCACTAAAGCTGCTACTGCTACTCCAAGGGATCCAGGTAACTCTTATGACTGGTCTCGCCCTGTTGATTCAATTATTGAAGATAGCGGTGTCAATGTCATTGAAAATATAGTTGGCAAACTAGAGTCTGGTGTACGACGAAAAGGTAAACTTTGTCTGAGAGAGAGTGCCAAGGTGGACTTCTCATCATGGAGAATTCCAACAACATCTCTTGTTTTAAGTTCCGACATATTTGGTCGGGACAAAGACAAGAATGAGATAATCAAAAAGCTGTTAGATGATACCCGTGATGCCGAATCACCTGTGACTGTGATCCCTATTGTGGGTATGGGTGGAATAGGAAAAACTACTTTGGCTCAACTGGTTTACAATGATGCCAAAGTCGTGGGAAAATTTGACACTAGAGCATGGGTTTGTGTTGCTGAAAATCCTGACCCTGTTAATGTTACAAGGACAATAATAGGGGCAATAGATTCTTCTCCCTGTAACATAGATCATTTTGATTCACTTCAGACCGATTTGAAGAAAAAATTGACAGGAATGACATTTTTAGTTGTTTTAGACGATGTCTGGAATGATCGACGAGACATGTGGGAGAATTTTCTAAAACCTTTTCAATATGGAAATGATGGAAGTAAGATTCTCCTAACAACCCGTAGTGAAAAGGTTGCTTCTGTGTTCGCAGCTAACAATCTACATTATCGACTAAGTTTATTGTCGAAGGAAGACTGTTGGTCTGTGTTTTTGAAGCATTCATCCATTTCTACTAATTCTAAACAATATGCAGCTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGGGGCTTGTTGCGCAATAAGTATAATGAAGGGGATTGGGAGAATATACTTGAATGTAAAATCTGGGAACTCTCTGAAGATGACAATATGATTGTTCCTGCATTAAGAGTTAGTTATCACTACCTCCCTTCACATTTAAAGCGGTGTTTTGTATATTGCTCATTATTTCCTGAGGATTATGAATTTGACAAAGATGAATTAATTTTGTTATGGATGGCTGAAGATCTTTTACAATCAAAGGAGAACAACACATTAGAAAAAATTGGTTGTTCTTATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTCTAGTACTCAGAGAGGGTTATTTGTAATGCATGATCTCATGCATGATCTAGCAACTTTTTTTGCTGGGAAATTCTATTTCAAACTCAAAGAATTTGGCCATCTACACAAGATAGACAACAAAACTCGTCATTTGTCATATGCTACAAAATATGAGGATAGCATCAAATTATTTCAAGGTGCCTATAATGGAGCAATACACATCAGAACATTTTTAGATCTTACTTGGCTTTGCTATGGTCAATCAATTGATATTGAAAGCGATTCTTGGCTCTTACGACAACAATTTGTGTGTTTAAGAGTTATGTCATTTAAACACTTTTCTATAGAGTCATTGCCTGATTCCATAGGTGAATTGATTCATTTGCGTTATTTGAATGTCTCTAACACACCTATTGTGACATTGTCCGAGTCATTATGTAAGTTATACAATCTCCAAACTTTGAAGTTGAGAAATTGTTTTAAGCTAGAGATGCTTCCCAGTCGCATGCAAGATCTCGTTAACCTGCACTACCTTGACATTCGAGGTGCTTTTCGTCTGAAAGAGATGCCGAAGGAAATGAGCAAGTTGAAACATCTAAACTTCTTAAGTGATTATATCGTGGGCAAGCACGAAGAGAATGGGATAAGAGAATTGGGAACACTGGACAATCTTCATGGCTCATTTTGCATTTCCAACTTGGAGAACATCAAGAATAGTGGTGAAGCTTTGAAGGCAAAGATGGGTAACAAGAAGCACATCAACACTTTAACATTGAATTGGCTTCCAAAGGGTGACATTGATGATTTTCAAAGTGAAAGAGATATACTTGACAAGTTACAACCTCATCAAAACTTGAAAGAGTTATCAATTAAGGGTTATCGTGGTGAAACATTCCCAGATTGGTTAGGCCTTTCTTGCTACTCTAATTTGACCAAATTGAATCTGTACTTTTGTATGAATTCTTGTGAACTTCCTTCACTGGGACAGTTACCCTCTTTACAGCATCTGGAATTTTCTGAACTTGATGGGTTGGAGAAAATTGATTTGGCGTTTTACAACAACAGTGGATCATTCGAGCAGGAGACACCCTTCAAATCTCTAGAAACTCTGAAAATTGAGAACATGGCTAATTGGCGGGAGTGGCATTTTCCTGATGAGTTCGATGGTTTTCCTGAGCTTAGAATCCTTTCAATAATAAACTGTCCGGTGTTAAGTGGAGGTCTGCCTGCTCACCTTCCGGCTCTGCAGGAACTTACCATTGTTGAATGTGAAGAGCTTGCTTGTTTGCTGCCGAGGGCTCCGAAGCTTCACCAATTAAATGTAGAGGGTGATGGATTTCCTACGATGATTGCGGCACCGCAAAATGTAGTAATTTCAAAAACCCAGCTGGCGAAGTCCGTACTGGAGTGCCTGTCCCACATCCAACAGCCACGTGTCCAATTCCTGCATATCAGTAACTGTCAGTCAGCCATATCAATTTCAGCAAATTGTTTGCCCGCTTCTTTAAAATACCTGAGAATCCGTAATTGTTCAAAATTAACGTTCTCAGAGCAACTGCAACACAAAACCCTAACGGAGATCTATGTAGCGGGGTGTGGTTCACTGACGGTGTTTCCAGTGGGGTCCCTTCCAGATCTCAACAAACTCACGATCCGTAAATGCCAAAGAATGAAATATGTTGAGGTTCCACAGGCTCTTCCAAGTCTCCGTTATTTAAGCATCTCGGACTGCCGCAATTTAGTATCCTTGCCGCCGCTAGGGTTGGCTGCGCTCCACCTAGAGCAGCTCTGTATAAACAAATGCCCAGAAATTGATTGTTTTGATGAGAAGTGTCTCCCGCAGAGTTTGGAAACACTTGAAATCAAGCAATGCCAGAAACTAGCGAGTTGGATAACATCAAAGGGTTTGCAGAGTCAAGGCCGTACCCGTCTTATTCTTGATCAATGA 3366 0.3999 MAAKLEGRAYLSSFVDAVSKKLSSILEDDFVLERNDSELKLLERLDDCLCDVGPVLDDAELKQFSDERVKKWLVDLQDALYMADDFLDELSTKAATATPRDPGNSYDWSRPVDSIIEDSGVNVIENIVGKLESGVRRKGKLCLRESAKVDFSSWRIPTTSLVLSSDIFGRDKDKNEIIKKLLDDTRDAESPVTVIPIVGMGGIGKTTLAQLVYNDAKVVGKFDTRAWVCVAENPDPVNVTRTIIGAIDSSPCNIDHFDSLQTDLKKKLTGMTFLVVLDDVWNDRRDMWENFLKPFQYGNDGSKILLTTRSEKVASVFAANNLHYRLSLLSKEDCWSVFLKHSSISTNSKQYAALEPIGRKIVEKCKGLPLAVKTLGGLLRNKYNEGDWENILECKIWELSEDDNMIVPALRVSYHYLPSHLKRCFVYCSLFPEDYEFDKDELILLWMAEDLLQSKENNTLEKIGCSYFDELVARSFFQPSSTQRGLFVMHDLMHDLATFFAGKFYFKLKEFGHLHKIDNKTRHLSYATKYEDSIKLFQGAYNGAIHIRTFLDLTWLCYGQSIDIESDSWLLRQQFVCLRVMSFKHFSIESLPDSIGELIHLRYLNVSNTPIVTLSESLCKLYNLQTLKLRNCFKLEMLPSRMQDLVNLHYLDIRGAFRLKEMPKEMSKLKHLNFLSDYIVGKHEENGIRELGTLDNLHGSFCISNLENIKNSGEALKAKMGNKKHINTLTLNWLPKGDIDDFQSERDILDKLQPHQNLKELSIKGYRGETFPDWLGLSCYSNLTKLNLYFCMNSCELPSLGQLPSLQHLEFSELDGLEKIDLAFYNNSGSFEQETPFKSLETLKIENMANWREWHFPDEFDGFPELRILSIINCPVLSGGLPAHLPALQELTIVECEELACLLPRAPKLHQLNVEGDGFPTMIAAPQNVVISKTQLAKSVLECLSHIQQPRVQFLHISNCQSAISISANCLPASLKYLRIRNCSKLTFSEQLQHKTLTEIYVAGCGSLTVFPVGSLPDLNKLTIRKCQRMKYVEVPQALPSLRYLSISDCRNLVSLPPLGLAALHLEQLCINKCPEIDCFDEKCLPQSLETLEIKQCQKLASWITSKGLQSQGRTRLILDQ* 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0357 1121 Gene3D - 328 412 IPR042197 -
Amo19g0357 1121 SUPERFAMILY L domain-like 488 904 - -
Amo19g0357 1121 PRINTS Disease resistance protein signature 194 209 - -
Amo19g0357 1121 PRINTS Disease resistance protein signature 267 281 - -
Amo19g0357 1121 PRINTS Disease resistance protein signature 365 379 - -
Amo19g0357 1121 PRINTS Disease resistance protein signature 619 635 - -
Amo19g0357 1121 Gene3D - 15 117 - -
Amo19g0357 1121 Gene3D - 413 498 IPR036388 -
Amo19g0357 1121 SUPERFAMILY RNI-like 811 1099 - -
Amo19g0357 1121 Pfam Rx N-terminal domain 14 96 IPR041118 -
Amo19g0357 1121 Pfam NB-ARC domain 171 413 IPR002182 GO:0043531
Amo19g0357 1121 PANTHER DISEASE RESISTANCE PROTEIN RP 23 963 IPR044974 GO:0006952
Amo19g0357 1121 Gene3D Ribonuclease Inhibitor 554 928 IPR032675 -
Amo19g0357 1121 Gene3D Ribonuclease Inhibitor 929 1112 IPR032675 -
Amo19g0357 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 428 IPR027417 -
Amo19g0357 1121 Gene3D - 151 321 IPR027417 -
Amo19g0357 1121 PANTHER OS05G0414200 PROTEIN 23 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0357 Amo-Chr19 4754527 4758041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0357 192 680 WRKY Transcription Factor Family AT5G45050 20.841 6.41e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0357 - - ahf:112708719 1657.88