Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0354 ATGAAGTACAGAGATGATGTTTATGACCGGATTTGGAGGTATGATCGCGACGTAGATACTTGGCGAAGCTTGGTATTAGATGATAACTCGACGGCCATTGATGTTGATGCTTACAAGTTACCATCCCAAGTAATGAAAACTGCTGCGCAATCACTGAATATGTCGCATCCCTTAGAATTGGGTCTCTCCACTTTGCTAATAGATCTTGATGACGCTACAGAATATTATGTGTACTTTCACTTTGTGGAAATTCAGAAACTCACGGCTGGGAAAAAAAGATTAATTAACATAGCCCTTAACTCGCAAAGCATACTCTCACAACCCTTGGTTCTTGAATACCTGAAACCAGTTACTGTTGGTTCTTCATACACAGCACAAGTTAATGCTACTTTTAGCATTAGTGCAGCGTTAGGATCGGAAGCTCCTCCTATCCTCAACGCCTTTGAGGTCTATAAGTTGATCACGCAAATTGATTCTCCAACTGATCCAAGAGATGTTGGTGGTATGAGGGACATCAAAAGTGCGTACCAGATATCTAGGTTAAGTTGGCAAGGAGATCCATGTCTTCCAGATCAATTTGCATGGGAGGGTCTCACTTGCAACTATCAAACCAATCCAAGGATCACGTCATTGAATCTGAGCTCAAGCAAACTGAGAGGGAAGATAAATTCATCATTCTCATATCTCACGGAACTAGAATACTTGGATTTATCTAATAACGAATTGGAAGGATCTCTGCCTGAATTTTTGGCAGACTTGTCAAGGTTAAAAGTTCTTAATTTGACAGGAAACAACCTTTCGGGTTTAATTCCTAAGGCTCTCCGAAAGAAGGTTGCAGATGCAAGTTTGCAATTAAGTGTTGGTGGTAATCCAAATCTCTGCGTAAAGGATTCATGCAACAATAAGAAGTTTGTTACACCACTCATGGCATCTCTTGCAGCAGCTTTAATTTTAATCCTTTTGATCGCTGGATTTTGGATATTTCAAAGAAGACGAAAACAAAAAGAAGCACATATTATTAAAGAGGGAGCATCGTTGAAATTAAAACAAGCAGCATTCACTTACAATGAGATTCTCTCTATCACTGATAACTTCAAAACAATGATTGGAGAAGGAGGATTTGGAAAAGTTTATTTTGGCATTTTACCGGATCATACTCAAGTTGCTATCAAGTTGCTTTCTCCATCATCACGGCAAGGTTATACGGAGTTTCAATCAGAGGTACATCTTCATAGCCTTATACGTCATAGGAACTTAGTCTCTCTCGTTGGGTATTGTGATGAAGGAGAGAATAAAGCATTGATTTATGAATATATGTCCAATGGCAATCTCCGGCAACATTTGTCAAGGGAAAACCCATATGTGTTGAATTGGAATGAGAGACTCAACATAGCAATTGATGCAGTGAATGATCAGTGGAAGCATGCTAAGATAGCTGATTTTGGTCTAAGTAGAGCTTTTCGTAATGATATTGATTCTCACATATCAACTTGTCCTGCTGGTACCCCAGGTTATATTGATCCAGAGTTTCAAAGGGTTGGATGTTTGAATAAGAAAAGCGATATTTACAGCACTGGCATCATTCTGCTTGAGTTGATAAGCGGCCGACCTGCAATATCAAGAGAAGCCAAAGGAGAAGCCATTCACATACTTGAATGGGTTAGGCCCATATTTGAAAGAGGTGATGATGATGACATTCAAAACATTGTTGATTCAAGGTTGTTGCAAGGAGAGTTCAACGTTGATTCCGCAAGAAAAGTTGTACAGATTGCAGTGTCTTGCGCTTCACCAACTGCAGCTGAAAGACCAGACATAAATCAAGTCCTTGTAGAGCTGAAGGAATGCTTATCTTTTGATACGCCTGAGGTGTCCGTACACATTGAAACTGACTGTTCTTTGATCTCCGGGTTCATCACGATTGATTGTGGATCGAACAGAGAATACTTGGACAAAGGAACTGGAATTTGGTACGAGAGCGATAAAAAATTTGTAGAAACAGGAGAGAATTGGAAAGTAGCAGGGAGTTCGAATTTAAACGATCCATACTTTGGGAAAGCGTCGAGAACGGCAAGATGCTTTCCGGAAGGAGTGAGGAACTGCTACACTCTGATGAGAGTGCCACAAAAACAAAGGTATCTAATTAGGGCGATATTCATATATAACAACTATGATGGCAAAAATCAAAACATGACATTTGATATTCATCTTGGAGTGAATCTGTGGGACACAGTGAGTCTTGATTCTGAGACTTATTGGTCTTTCACTGAGATTATATACACTCACACCAGTGACTCCATACAAATTTGTCTTGTAAAAACTGCCCAATCCACTCCTTGCATTTCTTCTTTGGAACTACGCCCTTTGAGTAGCTCTGTTTATGCTCTCAACTCAACCACCAATTCACGGCTACTGTTGTATTTACGGACTGACATTGCCTCCCTTGACGCACCTGAGTATGTCAGGTACAAAGATGATGTATATGACCGGATTTGGCGTTATGATCGCGATGTAGATAGTTGGCAAAGCTTGGAATTAGATAACTACTCAACCGCCATCGATATTGGAAGCAATAATAAATCTGATTCTTATAAAGTGCCGTCCAAAGTAATGAGGAGTGTTGCAACATCAGAGAGTGTTTCTGATGCCTTGGAATTTAGTTATAGCACTGTGCTTGGAATCGAACTTGAAAACTCTAGCGAGTATTATACATACTTCCACTTTGCTGAAATTGAGCAACTTGGGGTTGGAAAAAAAAGAATAATTGACATCACCCTTAACTCGCAAAGCATTCTCTCAGAACCTTTGGTTCTTGAATACTTGAAACCAGTCACTGTTAGTTCTGCATATACAGCACATGGTGATATTAATGTTAGCATTAGTGCAACTTCAGGATCAGAAGCTCCCCCAATCCTCAACGCCCTTGAGATCTATCGGTTCGTACCGGAAATTGATTTCCCAACTGACGCAAAAGACGAACTAGAATTCTTATGTATACAGAAGCAATATTACTATATATGTTTCAGGGATTTGTCTGACAATAAGTTGGAAGGACCTGTGCCTGAGTTTTTAGCAGAGTTGCCGAAATTAAAAGTTCTTAATTTAACTAAGAACAAGCTTTCAGGTTTAATTCCTGAGGCTCTATTGAAGAAGGCAGATAATAAGTCTTTGCAATTAAGAAAAGAAGTATGTTTGGAGTCAAAACAAAAAGCATTCAATTATACTGAGATTCTGAATATTACTGATAACTTCAAAACAATAATTGGAGAAGGAGGATTCGGAAAAGTTTATCTTGGCCTTCTACAAGATCACACTCAAGTTGCCGTCAAATTGCTTTCGGTATCTTCCAGACAAGGCTACAAAGAATTCCAATCAGAGGTAGAACTCCATAGTAGTATTCGTCATAGGAACTTGGTGTCCCTCGTTGGCTATTGTGATGAAGGAGAGATTAAAGCACTGATTTATGAATACATGGCAAATGGAAATCTCCATCGACATTTATCAAGACTAGATTATTTGCATAATGGTTGTAAGACACCTATTGTACATAGAGATTTGAAGACTTCAAACATATTACTAGATAAGTGGAATCATGCCAAGATATCTGATTTTGGTCTTAGCAGAGCTTTTCCTAATGATGATGATTCTCACATATCAACTCGCCCTGCTGGCACACCAGGCTACATTGATCCAGAGTTTCATAGGGTTGGATACTTGAATAAAAAGAGCGACGTTTATAGCTTGGGAATAATTCTGCTTGAATTGATGACGGGTGAAGCTGCAATCATAGTAAGAGATGATGGTGCCATTCACATACTTGAATGGGTTAGGCCCATACTTGAAAGAGGTGATGATATTCAAAACATTGTTGATTCAAGATTGTTGCAACAAGGAGACTTTAATGTTGACTCTTTAAGGAAAGTTTTTGAGATTGCCTTGTGTTGTACAAGAGTTGCAGCTCAAAGACCAGACATAAGTCAAGTCCTTTTAGACCTAAAAGATTTCTTATTTCTTGAAATGGTTAGCATTGCACCTCACATGTCTATGCAACTTGAAACTGATGAATTTTCTCTTGTAGGAAGGTAA 4083 0.3906 MKYRDDVYDRIWRYDRDVDTWRSLVLDDNSTAIDVDAYKLPSQVMKTAAQSLNMSHPLELGLSTLLIDLDDATEYYVYFHFVEIQKLTAGKKRLINIALNSQSILSQPLVLEYLKPVTVGSSYTAQVNATFSISAALGSEAPPILNAFEVYKLITQIDSPTDPRDVGGMRDIKSAYQISRLSWQGDPCLPDQFAWEGLTCNYQTNPRITSLNLSSSKLRGKINSSFSYLTELEYLDLSNNELEGSLPEFLADLSRLKVLNLTGNNLSGLIPKALRKKVADASLQLSVGGNPNLCVKDSCNNKKFVTPLMASLAAALILILLIAGFWIFQRRRKQKEAHIIKEGASLKLKQAAFTYNEILSITDNFKTMIGEGGFGKVYFGILPDHTQVAIKLLSPSSRQGYTEFQSEVHLHSLIRHRNLVSLVGYCDEGENKALIYEYMSNGNLRQHLSRENPYVLNWNERLNIAIDAVNDQWKHAKIADFGLSRAFRNDIDSHISTCPAGTPGYIDPEFQRVGCLNKKSDIYSTGIILLELISGRPAISREAKGEAIHILEWVRPIFERGDDDDIQNIVDSRLLQGEFNVDSARKVVQIAVSCASPTAAERPDINQVLVELKECLSFDTPEVSVHIETDCSLISGFITIDCGSNREYLDKGTGIWYESDKKFVETGENWKVAGSSNLNDPYFGKASRTARCFPEGVRNCYTLMRVPQKQRYLIRAIFIYNNYDGKNQNMTFDIHLGVNLWDTVSLDSETYWSFTEIIYTHTSDSIQICLVKTAQSTPCISSLELRPLSSSVYALNSTTNSRLLLYLRTDIASLDAPEYVRYKDDVYDRIWRYDRDVDSWQSLELDNYSTAIDIGSNNKSDSYKVPSKVMRSVATSESVSDALEFSYSTVLGIELENSSEYYTYFHFAEIEQLGVGKKRIIDITLNSQSILSEPLVLEYLKPVTVSSAYTAHGDINVSISATSGSEAPPILNALEIYRFVPEIDFPTDAKDELEFLCIQKQYYYICFRDLSDNKLEGPVPEFLAELPKLKVLNLTKNKLSGLIPEALLKKADNKSLQLRKEVCLESKQKAFNYTEILNITDNFKTIIGEGGFGKVYLGLLQDHTQVAVKLLSVSSRQGYKEFQSEVELHSSIRHRNLVSLVGYCDEGEIKALIYEYMANGNLHRHLSRLDYLHNGCKTPIVHRDLKTSNILLDKWNHAKISDFGLSRAFPNDDDSHISTRPAGTPGYIDPEFHRVGYLNKKSDVYSLGIILLELMTGEAAIIVRDDGAIHILEWVRPILERGDDIQNIVDSRLLQQGDFNVDSLRKVFEIALCCTRVAAQRPDISQVLLDLKDFLFLEMVSIAPHMSMQLETDEFSLVGR* 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0354 1360 Gene3D Phosphorylase Kinase; domain 1 1063 1156 - -
Amo19g0354 1360 ProSiteProfiles Protein kinase domain profile. 363 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0354 1360 Pfam Protein kinase domain 1084 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0354 1360 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 631 1002 - -
Amo19g0354 1360 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 475 623 - -
Amo19g0354 1360 Pfam Leucine rich repeat 206 266 IPR001611 GO:0005515
Amo19g0354 1360 Gene3D Transferase(Phosphotransferase) domain 1 1157 1340 - -
Amo19g0354 1360 Gene3D Ribonuclease Inhibitor 170 288 IPR032675 -
Amo19g0354 1360 Gene3D Ribonuclease Inhibitor 1003 1059 IPR032675 -
Amo19g0354 1360 PANTHER OS07G0107800 PROTEIN-RELATED 1062 1346 - -
Amo19g0354 1360 Pfam Malectin-like domain 640 978 IPR024788 -
Amo19g0354 1360 Pfam Malectin-like domain 2 152 IPR024788 -
Amo19g0354 1360 ProSiteProfiles Leucine-rich repeat profile. 1028 1049 IPR001611 GO:0005515
Amo19g0354 1360 Gene3D Transferase(Phosphotransferase) domain 1 345 469 - -
Amo19g0354 1360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1180 1192 IPR008271 GO:0004672|GO:0006468
Amo19g0354 1360 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 1062 1346 - -
Amo19g0354 1360 SUPERFAMILY Protein kinase-like (PK-like) 352 625 IPR011009 -
Amo19g0354 1360 ProSitePatterns Protein kinases ATP-binding region signature. 1087 1109 IPR017441 GO:0005524
Amo19g0354 1360 SMART LRR_typ_2 253 276 IPR003591 -
Amo19g0354 1360 SMART LRR_typ_2 1026 1049 IPR003591 -
Amo19g0354 1360 SMART LRR_typ_2 229 252 IPR003591 -
Amo19g0354 1360 SUPERFAMILY L domain-like 1009 1058 - -
Amo19g0354 1360 PANTHER OS07G0107800 PROTEIN-RELATED 1 469 - -
Amo19g0354 1360 ProSiteProfiles Protein kinase domain profile. 1081 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0354 1360 SUPERFAMILY L domain-like 191 276 - -
Amo19g0354 1360 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 1 469 - -
Amo19g0354 1360 Pfam Leucine Rich Repeat 1028 1048 IPR001611 GO:0005515
Amo19g0354 1360 Gene3D Transferase(Phosphotransferase) domain 1 470 628 - -
Amo19g0354 1360 Gene3D - 2 154 - -
Amo19g0354 1360 Gene3D - 817 979 - -
Amo19g0354 1360 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Amo19g0354 1360 ProSiteProfiles Leucine-rich repeat profile. 231 254 IPR001611 GO:0005515
Amo19g0354 1360 Pfam Protein tyrosine and serine/threonine kinase 365 467 IPR001245 GO:0004672|GO:0006468
Amo19g0354 1360 Pfam Protein tyrosine and serine/threonine kinase 474 610 IPR001245 GO:0004672|GO:0006468
Amo19g0354 1360 PANTHER OS07G0107800 PROTEIN-RELATED 1005 1059 - -
Amo19g0354 1360 SMART serkin_6 1081 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0354 1360 SMART serkin_6 363 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0354 1360 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 1005 1059 - -
Amo19g0354 1360 SUPERFAMILY Protein kinase-like (PK-like) 1062 1331 IPR011009 -
Amo19g0354 1360 PANTHER OS07G0107800 PROTEIN-RELATED 631 1002 - -
Amo19g0354 1360 PANTHER OS07G0107800 PROTEIN-RELATED 475 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0354 Amo-Chr19 4605973 4633070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0354 1 617 Receptor kinase-like Gene Family AT1G51830 39.761 1.57e-145 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Amo19g0354 Malectin_like 9.9e-85 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0354 - - egr:104424136 903.664