Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0317 ATGCCTGTGCTGCGTAGCGGAGCGCGCAGGGGCCGGGCAGCAGTGAAGAAGAAGAAGCAGCAAGAACAGCAGGAGGAGCCACAGCTACAGCCACATCAGCAGCAGAGTCCAGTGGTGGAAGAGGAAGCGATTGCTACGAGAACAAGGAGGCGTCGTGCAGCAGCGGCGGCAGCAGAGGTTATTGTGCCAAAGAATAGCAATAAAAGGAAGGAGGAGGCGCAGCTGAAGGTCAATGAGAGGGTAGTTGTTGGGAAGGAAGAAGAGAAGAAGGGAATTGAGGTAGGTGAAGGAGCCGATAAAGAAGAAGTAGGAGAGAAACAGATGGATGATTTCGACAGCGGCGGCCGCAGCAATAAGGCCAATGCTGGTGAAGATGAGGGCAGCACTGCTCCCCTTCCAGAGAAGATTCAAGTAGGTGGTTCCCCTTTGTATAAATTAGAAAGAAAACTTGGAAAGGGTGGGTTTGGTCAAGTATATGTTGGTCGACGTCTTACTGGTGGAAATTTGAATGAGAGAACTGGACCTGGAGCTGTAGAGGTTGCATTAAAATTTGAGCATAGAAGTAGTAAAGGATGTAATTATGGACCACCATACGAGTGGCAAGTGTACAATACTCTTGGTGGCAGTCATGGTGTGCCTCAAGTACATTACAAGGGCAGGCAAGGTGACTATTATGTTATGGTTATGGATATGCTGGGTCCGAGCTTGTGGGATGTTTGGAATAACAACTCCCACAGCATGTCCACTGAAATGGTCGCATGTATTGCCATCGAGGCAATATCCATCTTGGAGAAGATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACACCTAATGAGAAGAAATTGTTTCTTGTCGATCTTGGTTTGGCTACTAAATGGCGAGACAGTACAACGGGTTTGCATGTAGAATATGACCAAAGGCCAGATGTTTTCAGGGGCACAGTCCGTTATGCTAGTGCAAATGCCCATTTAGGGAGAACTGGAAGCAGGAGGGATGATTTGGAATCTCTAGCTTATACACTGATTTTTCTTCTTCGAGGTCGTCTTCCTTGGCAGGGTTTCCAGGGAGAAAACAAAGGATTTCTTGTTTGCAAGAAGAAGATGGGAACYCCTCCGGACAGCTTATGTTGCTTTTGCCCCCAGCCTTTTAAACTATTTGTTGAACATGTTGTGAACTTAAAGTTCGATGAAGAACCTAACTATGCAAAATACATTTCTTTCTTCGATGGAATTGTTGGTCCAAATCCAGATATCAGGCCAATTAATACAGAAGGAGCACAAAAGCTCATTGGTCACAAGAGAGGCCGGCAGGCAATGGAAGATGATGATGATGAACAACCAAAAAAGAAGTATCGTATGGGTTTGCCAGCAACTCAGTGGATAAGCGTTTACAATGCTCGTAGACCTATGAAACAAAGATATCACTACAATGTGTCTGATCAAAGGCTATCCCAGCACATTGAGAAAGGAAACGAGGATGGTTTATATATTAGCAGTGTTGCTTCATGTCAGAACCTGTGGGCCTTAATAATGGATGCAGGAACAGGTTTCACTTCCCAAGTGTATGAACTTTCCTATTACTTTCTCCATAAGGAATGGATCATGGAGCAGTGGGAAAAAAATTACTATATCAGCGCAATTGCCGGAGCTGCAAATGGAAGCTCGCTAGTAGTGATGTCTAAGGGCACACAGTATCTGCAGCAATCATACAAAGTTAGTGATTCGTTTCCTTTCAAGTGGATCAACAAAAAATGGAGGGAGGGATTTTATGTCACTTCAATGGCTACTTCATTGAACAGATGGGGAGTAGTCATGTCTCGTGGTGCAGGATTTTCAGACCAGGTGGTTGAGCTAGATTTCCTGTACCCTAGTGAAGGGATTCACAAGCGGTGGGATTGTGGATACCGAATCACCTCGACTGCCGCAACATGGGACCAAGCGGCTTTTGTCCTGAGTGTGCCCAGGAAGAAGCCTGTGGATGAAACTCAGGAAACACTTCGGACTTCTGCCTTTCCGAGTACGCATGTCAAGGAGAAGTGGGGGAAGAACCTCTACATTGCTTCTATATGCTATGGACGTACAGTTTCTTGA 2127 0.4593 MPVLRSGARRGRAAVKKKKQQEQQEEPQLQPHQQQSPVVEEEAIATRTRRRRAAAAAAEVIVPKNSNKRKEEAQLKVNERVVVGKEEEKKGIEVGEGADKEEVGEKQMDDFDSGGRSNKANAGEDEGSTAPLPEKIQVGGSPLYKLERKLGKGGFGQVYVGRRLTGGNLNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHSMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPNEKKLFLVDLGLATKWRDSTTGLHVEYDQRPDVFRGTVRYASANAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTPPDSLCCFCPQPFKLFVEHVVNLKFDEEPNYAKYISFFDGIVGPNPDIRPINTEGAQKLIGHKRGRQAMEDDDDEQPKKKYRMGLPATQWISVYNARRPMKQRYHYNVSDQRLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFTSQVYELSYYFLHKEWIMEQWEKNYYISAIAGAANGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTSMATSLNRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITSTAATWDQAAFVLSVPRKKPVDETQETLRTSAFPSTHVKEKWGKNLYIASICYGRTVS* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0317 708 MobiDBLite consensus disorder prediction 26 41 - -
Amo19g0317 708 Pfam Protein kinase domain 144 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0317 708 PANTHER - 97 682 - -
Amo19g0317 708 MobiDBLite consensus disorder prediction 92 113 - -
Amo19g0317 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Amo19g0317 708 PANTHER CASEIN KINASE-RELATED 97 682 - -
Amo19g0317 708 SMART serkin_6 144 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0317 708 ProSiteProfiles Protein kinase domain profile. 144 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0317 708 SUPERFAMILY Protein kinase-like (PK-like) 144 424 IPR011009 -
Amo19g0317 708 MobiDBLite consensus disorder prediction 1 51 - -
Amo19g0317 708 CDD STKc_CK1 144 420 - -
Amo19g0317 708 ProSitePatterns Protein kinases ATP-binding region signature. 150 183 IPR017441 GO:0005524
Amo19g0317 708 Gene3D Transferase(Phosphotransferase) domain 1 110 466 - -
Amo19g0317 708 MobiDBLite consensus disorder prediction 92 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0317 Amo-Chr19 3870876 3876589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0317 106 383 AGC Kinase Gene Family AT3G08730 23.571 3.43e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Amo19g0317 Pkinase 2.7e-16 CL0016