Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0284 ATGGCTTCACAACATTTTGGAGTAGTGTGTAGCTGCATGATTATGACGATGATAATTTTCTTGGGTGCTAGTTCAGCTGTTGAAGGTGCTAGAGATTTCAAAGTTGGTGATCACTTGGGATGGCATGAACCTGGCCCCAATAATATTTCATATTACATTCAATGGGCTCAAATGAACAGATTCCAAATTGGTGACTCTCTCGTATTTGAGTACCAAAATGACTCAGTTCTAGTTGTTGAAAAATGGAAGTACTTCCATTGTGATCCAAATAATCCCATAACATCTTATGATGATGGAAACAGCACAGTGATTCTTGATAGGTCCGGTTTCTTCTACTTCATAAGTGGAACAGAGAATCACTGCCATAATGGGCAAAAACTTATTGTGGAAGTTATATCACCACAACACATGGCAATTTTTCGGCCAGCCGCGTCCCCTGCGCCAACCGAAGACGCTTCCTCATCATCAGAACTAGCTCCTTCACCCTATTATCATCATCATTATCATGGCTCCAATGCTTCTTCATCCACATCACGTTTCATGATGATTGGTTCAGCATTTATGGCTCTTCTTGTCACCTTTGTAGTTGTGCTAGTTTTAGCACCATGA 609 0.4089 MASQHFGVVCSCMIMTMIIFLGASSAVEGARDFKVGDHLGWHEPGPNNISYYIQWAQMNRFQIGDSLVFEYQNDSVLVVEKWKYFHCDPNNPITSYDDGNSTVILDRSGFFYFISGTENHCHNGQKLIVEVISPQHMAIFRPAASPAPTEDASSSSELAPSPYYHHHYHGSNASSSTSRFMMIGSAFMALLVTFVVVLVLAP* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0284 202 PANTHER BLUE COPPER PROTEIN 17 197 IPR039391 GO:0009055
Amo19g0284 202 Pfam Plastocyanin-like domain 50 125 IPR003245 GO:0009055
Amo19g0284 202 ProSiteProfiles Phytocyanin domain profile. 31 133 IPR003245 GO:0009055
Amo19g0284 202 CDD OsENODL1_like 31 132 IPR041846 -
Amo19g0284 202 Gene3D - 29 136 IPR008972 -
Amo19g0284 202 PANTHER EARLY NODULIN-LIKE PROTEIN 2 17 197 - -
Amo19g0284 202 SUPERFAMILY Cupredoxins 30 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0284 Amo-Chr19 3349619 3350780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0284 13 146 Phytocyanin Superfamily AT1G79800 50.000 3.00e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0284 - - aip:107614831 391.349