Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0271 ATGGCTGAGGCCTTGCTTGGAATTCTGCTGGAGAACGTGATCCCTTTGGTCCAGAGAGAATTTGCAGCCTTCTCTGGAATCAAGGAAAAGACTGAAGACCTATCACACACTTTAGCATTCATCAAAAAAGTTCTTGATGATGCTAAGGAGAAACAATGGTCTAACCCCCCTATCAAGATTTGGCTCCAACGACTTAAAGATGCAACGTACGTGCTGGATGATGTCCTTGATCAGTTGCCTACTGAATCCTCTCAACATGGGTGGTTATCATCTTTCAAACCGAACAACATCATGCTTCGCGGCAAGGTTGGACATGAGCTGAATGAGATCGTACGGAGATTGGATCGAATTGCTGAAGATAAGAACAAGTTTCTTCTAAGGGAAGGAGTCAGGGAGAGGCCAACTGAAGTAGCTGAATGGCGCCAAACCAGCCCAACTATTATTAGTCCTCAAGTACTTGGACGAGATGCAGATAAAGAGAAGGTTGTGGAGTTTCTTCTTAGCCCGGCACGAAACTCTGAGTTCCTTTCTGTCTATCCCATGGTTGGCTTAGGTGGTCTTGGGAAAACAACACTTGCTCAGTTGGTCTACCATGATGAACGAGTAAGTAGCCATTTTAACCTGAAGATTTGGCTTTGTATTTCTGAGACTTTCAATGTCAGAAGGATTTTGTGTTCCATTGTACAATCTATCACAAAGAATGAGTGCAAAGTTTTGGAGCTACCTGTGATGGAAGAAAAAGTGAAAGGATTGCTTCAGGGTAAAAAGTTCTTATTGGTTTTAGATGATGTGTGGGTTAAAAACCAACAATTGGAGTTCGGATTAAACGAAGACAAATGGGATCAGTTGAAATCTGTTTTGTGTTGCGGATCCAAAGGTGCCTCTATTTTGGTGTCCACTCGTGATAAAGATGTTGCAACAATCATGGGTGCATACCAAACTCATGATTTGTCAGGCCTATCTGAAGATGATTGTTGGTCATTGTTCAGACAACGTGCATTTAGACCTGACAAAGCGGAGGATGAAGAGCTTGTAAAAATCGGCAAGGAGATAGTGAGCAAGTGTGGGGGATCGCCTCTCGCAGCAAAAGCATTAGGAGGTCTGATGCGCTCCAGAAATACCAGAAATGAATGGCTTGAGGTTAAGGAAAGTAGCCTATGGACTTTACCAAATGAGAATCATATTCTACCTGCATTGAGGTTGAGCTATTTTCATCTACCTCCAACATTGAAGCAGTGCTTTGCTTTCTGTGCTATATTTCCCAAAGATGAAAGTATCAAGAAACAAGAATTGATTCATCTTTGGATGGCCAACGGGTTTATATCATCTCGGGCAAACTTGGATGTAGAGGAGGTTGGCAACATGATATGGAATGAGTTGTTCCAAAAGTCATTTTTTCAAGATGTCGAGATCAATGATTATTCAGGTGATGTTTCTTTCAAAATGCATGATCTAGTCCATGATCTTGCTCAGTCAATCACAGAAAAAGAGTGTATGTGTTTGGAGGAAGCAAACCATACTGACTTGCCGAAAAACACACATCATATTGGTTTCAAGTGTGATGAAGTAACTGAAACACCATTCAGAAAGGGAGCATGTGAGAAAACTGAATCTTTGCGAACGTTATATGATTTGAATTGGTATGCTCCGCGGAATGCAAGTTATTTTTGTCCAACAAACATTTCTCTTCGAGTGTTATGCACATACACTTCCAAATTTCCCTCAGTCGAGAATTTCAGCCACTTGAGATATTTAGGGCTTTGTGATCTAGAAATAAAGACCATTCCGGATTCTATCTACAGTTTACACAAATTAGAAATCTTGAAACTAATGCAATGTAATGAACTTTTTAGTCTGCCAAAACACTTGACTCGCTTGCATAATCTCCGTCATCTTGCCATTGATGGCTGTGATGCACTATCTGAAATGTGTCCAGACATTCACAAACTGTATGAATTGAAAACACTTGAGTGTATACATTGTGAATTCAGCAAAAGGACATAG 2004 0.4082 MAEALLGILLENVIPLVQREFAAFSGIKEKTEDLSHTLAFIKKVLDDAKEKQWSNPPIKIWLQRLKDATYVLDDVLDQLPTESSQHGWLSSFKPNNIMLRGKVGHELNEIVRRLDRIAEDKNKFLLREGVRERPTEVAEWRQTSPTIISPQVLGRDADKEKVVEFLLSPARNSEFLSVYPMVGLGGLGKTTLAQLVYHDERVSSHFNLKIWLCISETFNVRRILCSIVQSITKNECKVLELPVMEEKVKGLLQGKKFLLVLDDVWVKNQQLEFGLNEDKWDQLKSVLCCGSKGASILVSTRDKDVATIMGAYQTHDLSGLSEDDCWSLFRQRAFRPDKAEDEELVKIGKEIVSKCGGSPLAAKALGGLMRSRNTRNEWLEVKESSLWTLPNENHILPALRLSYFHLPPTLKQCFAFCAIFPKDESIKKQELIHLWMANGFISSRANLDVEEVGNMIWNELFQKSFFQDVEINDYSGDVSFKMHDLVHDLAQSITEKECMCLEEANHTDLPKNTHHIGFKCDEVTETPFRKGACEKTESLRTLYDLNWYAPRNASYFCPTNISLRVLCTYTSKFPSVENFSHLRYLGLCDLEIKTIPDSIYSLHKLEILKLMQCNELFSLPKHLTRLHNLRHLAIDGCDALSEMCPDIHKLYELKTLECIHCEFSKRT* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0271 667 CDD RX-CC_like 2 119 IPR038005 -
Amo19g0271 667 Gene3D - 6 118 - -
Amo19g0271 667 PANTHER OS08G0543100 PROTEIN 29 660 - -
Amo19g0271 667 PANTHER DISEASE RESISTANCE PROTEIN RP 29 660 IPR044974 GO:0006952
Amo19g0271 667 Gene3D - 402 493 IPR036388 -
Amo19g0271 667 Gene3D - 139 314 IPR027417 -
Amo19g0271 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 417 IPR027417 -
Amo19g0271 667 SUPERFAMILY L domain-like 481 664 - -
Amo19g0271 667 Pfam Rx N-terminal domain 6 87 IPR041118 -
Amo19g0271 667 PRINTS Disease resistance protein signature 178 193 - -
Amo19g0271 667 PRINTS Disease resistance protein signature 251 265 - -
Amo19g0271 667 PRINTS Disease resistance protein signature 355 369 - -
Amo19g0271 667 PRINTS Disease resistance protein signature 600 616 - -
Amo19g0271 667 Pfam NB-ARC domain 156 383 IPR002182 GO:0043531
Amo19g0271 667 Gene3D Ribonuclease Inhibitor 500 667 IPR032675 -
Amo19g0271 667 Gene3D - 319 401 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0271 Amo-Chr19 3189914 3191917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0271 183 497 WRKY Transcription Factor Family AT5G45050 23.750 6.05e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0271 - - ahf:112776963 1360.9