Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0255 ATGATGGCTGGGAACCCTAATAATTGGTGGAGCATGAATCCATCTTCTTTGATCCCTTATACTCAATATGTGCTTGGATCTTCTTCTTCTTCTTCTTCAATTCCTTTCAATCCTTTGGTGGCTGAAATTCCAGAACCTTCTCCTCAGTCTTGGAGCCAACTTCTTTTCACTGGGTTACCAGGAGAAGAAGAGAGACTTGGATTCAATCATTTTCATCAATCAAAAAAGTTAGAAAACTGGGATGACCATAACATCCTCCTCAACAACAACAATAATCAACACAACACAAGAGTTGGTCCAAATAATAATAATAATAATAATAATATGATTGTTGATGGAATAATAAAGCAAGAGGTTTCCCAAAGTGGCAACTTGTACGGCCAAGAGGAGTTTCATGCTTCTAATGGGTCAACTTGGTCAACACATATGGTTCCCATTAATTCTTCATCACCTAGGTCAAGTGTCACTACCAATAATAATAACAATAATAATTTATTGGATTTCTCTTATAACAAGGTTGATCATAGCAAGAACAACCAACTACCTTATGCCACACCTCAGTGTAATAGCACATCAAGTGCTGGAATTTGCAAGAAAGCTAAGGGTCAATCAACTTCAAGCTTACCACCATTGAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTGTTGTTAGAAGCCATTGGATATATTAGATTCCTTCAGAGTCAAATTGAGGCACTTAGTTCTCCTTACTTAGGCAATGGATCAAAAAACATGAGGAGTCAGCAGTATGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGATACTGGCCTGAAAAGAAAGGCAGCTTCAAGCCAGGATTCAAAAGATAATAAGGCAAAGGATTTGAGGAGTAGAGGATTGTGCTTGGTACCTGTATCCTTCACCCAACATGTTGGAAATGAAAATGGAGCTGATTTCTGGGCACCTGCATATGGTAGTGGATTCTAA 1047 0.3916 MMAGNPNNWWSMNPSSLIPYTQYVLGSSSSSSSIPFNPLVAEIPEPSPQSWSQLLFTGLPGEEERLGFNHFHQSKKLENWDDHNILLNNNNNQHNTRVGPNNNNNNNNMIVDGIIKQEVSQSGNLYGQEEFHASNGSTWSTHMVPINSSSPRSSVTTNNNNNNNLLDFSYNKVDHSKNNQLPYATPQCNSTSSAGICKKAKGQSTSSLPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLGNGSKNMRSQQYVHGERNSVFPEDPGQLLNDTGLKRKAASSQDSKDNKAKDLRSRGLCLVPVSFTQHVGNENGADFWAPAYGSGF* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0255 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 251 IPR011598 GO:0046983
Amo19g0255 348 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 335 - -
Amo19g0255 348 PANTHER OS05G0228400 PROTEIN 32 335 - -
Amo19g0255 348 CDD bHLH_AtbHLH_like 212 259 IPR045239 -
Amo19g0255 348 Gene3D - 212 274 IPR036638 GO:0046983
Amo19g0255 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 212 263 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0255 Amo-Chr19 2990582 2996958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0255 165 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 60.902 1.85e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0255 - - aip:107617848 640.958