Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0242 ATGAGTTGCTCATTTAAGACTTTCAACAAACACCTCACACTCCTCTGCTTCCATAAGTGCATCACCTCTTATGGTTTCATACCTTCACTTTCTCACTTTCTTCCACCGCTTCTGAGCTCGCGTTCCTCTCAGCTTCTACATCACTTGGCTTCTCATTCTGCTTCAGTTATGGAGGTGTTCAAAGCAGTTGCCAAGAACGAACTTGCAACTCATGGAAGTGTTGCTATCAGAGCTGACCAGAAGAGTTATAGTTACAGGCAACTAATCTTGTCCGCAGAGAAGATATCTAATATATTGTGTGGCAGTGATGTAAAGACAGGAAACCTTAGTGGAGCTCGGATAGGAATTGTAGCCAAACCCTCTGCCGAATTTGTAGCTGGAGTACTTGGGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTAAGCTATCCAGAACCAGAGCTCTTACATGTGATTAATAATTCGGATGTGTCCACAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAACCTTGCCAATAAAACCTCTTCTCAGTTTTTTCATCTCCCACCTGTTCTCACTAAGTCCTCAGAGAAAAGCAGTGATGAAGATTCACAAAATGGGGAAATTGATGTTGATAGAATTTTCCGGGACAATATTGGAAAACCAAGTGAAGATCCAGCACTGATTTTGTACACAAGTGGGACAACAGGTAAACCTAAAGGAGTGGTTCATACTCACAGAAGCATTGCTGCCCAGGTCCAAACCTTGGCAAATGCATGGGAGTATACATCTGCTGATAAGTTTCTACACTGCCTACCGTTGCATCATGTTCATGGACTTTTCAATGCTTTATTTGCCCCTCTCTATGCAGGATCCTCGGTTGAATTTATGCCAAAATTTAGTGTGAGGGGAATTTGGCAGAGATGGCGTGAGTCATATCCATCCGAAGGATCTAAGGTTGATGATGCTATAACTGTTTTCACTGGAGTTCCAACTATGTACACCCGGTTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCCACCTCAGCATCTGCTGCACGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTCCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACCGGGCATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCTTTGAAAGGAGAGCGTAAACCGGGCACTGTTGGCAAACCATTTCCTGGTATAGAGGTCAAGATTCTTTCAGATGAGGACAGTGGGAAAGAAGAGACTAAAGTGGGGGAGCTTTGTGTTAAAAGCCCTTCATCTTTTAAAGAATATTGGAAACTTCCGGAGATAACGAAAGAATCATTTACTGAAGATGGATTCTTTAAGACTGGGGATGCAGTTACTACGGATAAAGATGGATACTACATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTACAAACTATCTGCCTTAGAAATTGAATCAGTTATACTAGAGCATCAAGCTGTCGCGGAATGCTGCGTTTTGGGTTTACCTGACAAAGATTACGGGGAAGTTGTCGGTGCGATTATTGTACCAGAGGCTGATGTCAAGAGAAAGCGAGATGAAGAATCAAAGCCTGTTCTAAGCCTGGAAGAGTTATCCAGCTGGGCCAAACCCAAAATTGCACCTTACAAGATACCAACAAAACTTTTTGTTTGGGACTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAAATGCTAGCTTCGGAACACTAA 1800 0.4306 MSCSFKTFNKHLTLLCFHKCITSYGFIPSLSHFLPPLLSSRSSQLLHHLASHSASVMEVFKAVAKNELATHGSVAIRADQKSYSYRQLILSAEKISNILCGSDVKTGNLSGARIGIVAKPSAEFVAGVLGTWFSGGVAVPLALSYPEPELLHVINNSDVSTILSTEDHSELMQNLANKTSSQFFHLPPVLTKSSEKSSDEDSQNGEIDVDRIFRDNIGKPSEDPALILYTSGTTGKPKGVVHTHRSIAAQVQTLANAWEYTSADKFLHCLPLHHVHGLFNALFAPLYAGSSVEFMPKFSVRGIWQRWRESYPSEGSKVDDAITVFTGVPTMYTRLIQGYHAMDPELQATSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIEVKILSDEDSGKEETKVGELCVKSPSSFKEYWKLPEITKESFTEDGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVILEHQAVAECCVLGLPDKDYGEVVGAIIVPEADVKRKRDEESKPVLSLEELSSWAKPKIAPYKIPTKLFVWDSLPRNAMGKVNKKELKKMLASEH* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0242 599 Pfam AMP-binding enzyme C-terminal domain 500 585 IPR025110 -
Amo19g0242 599 Gene3D - 60 483 IPR042099 -
Amo19g0242 599 PANTHER MALONATE--COA LIGASE-LIKE 5 597 - -
Amo19g0242 599 SUPERFAMILY Acetyl-CoA synthetase-like 55 597 - -
Amo19g0242 599 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Amo19g0242 599 Gene3D - 486 599 IPR045851 -
Amo19g0242 599 CDD MCS 73 593 - -
Amo19g0242 599 Pfam AMP-binding enzyme 70 489 IPR000873 -
Amo19g0242 599 PANTHER ACYL-COA SYNTHETASE 5 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0242 Amo-Chr19 2802451 2809983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0242 222 597 Monolignol Biosynthesis Gene Families AT4G19010 28.535 8.82e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0242 K18660 - gmx:100813324 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0242 19 2802451 2809983 Amo19g0242 19 2802451 2809983 ECH