Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0224 ATGGCTGAGGCCTTGCTTGGAGTTGTGCTGGAGAAATTGACCCCTTTGATCCTGAATGAATTTGCAGCCTTCTTTGGAATCAAGGAAAAGGCTGAAGAGCTAACACTCACTTTAGAATTAATCAAAGCTGTTCTTGATGATGCTGAGGAGAAACAATGGTCCAATCGTCCTCTCAAGGTGTGGCTGCAGCAGCTTAAAAATGCAATGTACCCTGGGTGCTTATCATCTTTGAATCCAAAGAACATGATTCATCGGCGTGAGCTTGGGAAGAAGTTGAATAAGATAATAGGCAGGTTGGATCGAATTGCTCAACGTAGGAGCAACTTTGATCTTAGACAAGTTGTGAGGAAAAGGTCAAGTGAAGTTGCTGAATGGCGTCAAACAAGCTCAACTATCGCCCTTCCTCAAGTGTACGGACGAGATGAAGATAAAAAGAAAGTAGTGGAGTTTCTTCTTAGCCCATCACGAAGCTCTGAGTCCCTTTCCGTCTATCCCATTGTTGGATTAGGTGGTCTTGGAAAAACAACACTTGTTCAGATGGTCTACAATGATCAGCAAGTAGGTAACCATTTTGATTTGAAGATTTGGGTCTGTGTTTCTGAGAATTTTACTAGGGGGAGTATGTTGCGTTCCATTCTAAAAGCTATGGAAGTGGATAAGTATGAGAGCATGGATTTAGATGCAATGGAGAAAAAAGTGAAAGAATTGCTACAAGGTAAAAAGTATTTATTGGTTTTAGATGATGTCTGGAAAAGAAGCCAAGAAATGGAACTCGGATTAACCCAACACAAATGGGATGAGTTAAGAACTGTATTGTCTTGTGGATCTAAAGGCTCCTCCATTTTAGTATCCACTCGCGATAAGCATGTTGCAACAATTATGGGAACATGCCAAGCTCATCATTTGGACCGTCTATCCGATGATGATTGTTGGTCGTTGTTTAAACTGCGCGCATTTGGAGCTGACCGAGAAGAGCGTGCAGAGCTTGTAGCAATAGGGAAGGAGATAGTCAGGAAATGTGGAGGATCACCTCTTGCAGCACTGGCATTAGGTGGTGTGATGCAATCCAGAAGCACGGAAAAAGAATGGCTTGAAGTTCAGAAAAGTGAGCTTTGGAGTTTACCAGATGAGAATGACATTATGCCTGTCTTGAGATTAAGCTACTCTTCTTTAACGCCAACTCTAAAGCAGTGTTTTGCTTTCTGTGCCATATTTCCCAAAGATACAGAAATTAAGAAGCAAGAATTGATTTATCTTTGGATGGCTAATGGATTTATTTCATCCCGGCCGAACTTGGAGGTAGAAGAGGTTGGCCACATGGTTTGGAATGAATTATACCAAAAATCATTCTTCCAAGATGGGGGGATCCATGATCTTGCTCAATCAATTTCAGAGGAAGAGTGTGTATGCTTGGAGAAACAAAACCTTAATCATTCTTCAAGAAATCCCCATCATATTGGTTTTCACTACTTTAATGCAAATCAATTCAAGAAGAGCTCCTTTGAGAATGTTGAATCCTTGAGAACATTGTATCAAATGAATTCATATGGATTTGAAAAATTTAGTTCGAGCTTGGTTCGAACAAATCATTCTCTTCGGGTTTTGTGCTTATATTGTAGAAACATAACATCTTTTGGGAGTTTAAGTTGCTTGAGGTATTTGGAACTTCAAGCTTACCCAAATAAGCTCATAGAGAGCCTGCCTGGTAGTATTTGCAATTTGCGCAAATTGGAAATCTTGAAACTAAAAGAAATGTGGAGGCTTCGCGGTCTACCCAAACACTTGACAAGGATTCGAAATCTTTGA 1806 0.4042 MAEALLGVVLEKLTPLILNEFAAFFGIKEKAEELTLTLELIKAVLDDAEEKQWSNRPLKVWLQQLKNAMYPGCLSSLNPKNMIHRRELGKKLNKIIGRLDRIAQRRSNFDLRQVVRKRSSEVAEWRQTSSTIALPQVYGRDEDKKKVVEFLLSPSRSSESLSVYPIVGLGGLGKTTLVQMVYNDQQVGNHFDLKIWVCVSENFTRGSMLRSILKAMEVDKYESMDLDAMEKKVKELLQGKKYLLVLDDVWKRSQEMELGLTQHKWDELRTVLSCGSKGSSILVSTRDKHVATIMGTCQAHHLDRLSDDDCWSLFKLRAFGADREERAELVAIGKEIVRKCGGSPLAALALGGVMQSRSTEKEWLEVQKSELWSLPDENDIMPVLRLSYSSLTPTLKQCFAFCAIFPKDTEIKKQELIYLWMANGFISSRPNLEVEEVGHMVWNELYQKSFFQDGGIHDLAQSISEEECVCLEKQNLNHSSRNPHHIGFHYFNANQFKKSSFENVESLRTLYQMNSYGFEKFSSSLVRTNHSLRVLCLYCRNITSFGSLSCLRYLELQAYPNKLIESLPGSICNLRKLEILKLKEMWRLRGLPKHLTRIRNL* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0224 601 Gene3D - 6 117 - -
Amo19g0224 601 PANTHER OS10G0130600 PROTEIN 81 453 - -
Amo19g0224 601 PANTHER DISEASE RESISTANCE PROTEIN RP 81 453 IPR044974 GO:0006952
Amo19g0224 601 SUPERFAMILY L domain-like 456 601 - -
Amo19g0224 601 PANTHER OS10G0130600 PROTEIN 456 596 - -
Amo19g0224 601 Gene3D - 304 387 IPR042197 -
Amo19g0224 601 Gene3D Ribonuclease Inhibitor 467 601 IPR032675 -
Amo19g0224 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 402 IPR027417 -
Amo19g0224 601 Coils Coil 31 51 - -
Amo19g0224 601 CDD RX-CC_like 2 103 IPR038005 -
Amo19g0224 601 PRINTS Disease resistance protein signature 236 250 - -
Amo19g0224 601 PRINTS Disease resistance protein signature 340 354 - -
Amo19g0224 601 PRINTS Disease resistance protein signature 163 178 - -
Amo19g0224 601 PRINTS Disease resistance protein signature 572 588 - -
Amo19g0224 601 Pfam NB-ARC domain 141 368 IPR002182 GO:0043531
Amo19g0224 601 Gene3D - 388 466 IPR036388 -
Amo19g0224 601 PANTHER DISEASE RESISTANCE PROTEIN RP 456 596 IPR044974 GO:0006952
Amo19g0224 601 Gene3D - 120 300 IPR027417 -
Amo19g0224 601 Pfam Rx N-terminal domain 6 70 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0224 Amo-Chr19 2566744 2569016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0224 166 405 WRKY Transcription Factor Family AT5G45050 24.898 4.40e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0224 - - ahf:112709874 944.495