Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0166 ATGGCTAGACCACAACAACGCTATAGAGGTGTTCGCCAGAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGCCACCCTTTATTAGCATATGATGAAGCAGCTAGGTTAATGTGTGGACCAAAAGCAAGAACCAATTTCCCATTTAATCCAAATTTGTCACAATCATCATCATCATCTTCTTCTTCTTCTTCTAAGCTACTATCTCCTACTTTGACTGCAAAATTACACAAATGCCACTTGGCTTCCCTTGCCCTTCAAATGTCCAATAACAAGCAAAAAACATCACAACCCAACAAAGATCCTCAACCACCACCACCACCATCATCATCATCAACATCATCAAATAATAGATTCAATACTCAATTCCCAATTGGTGCTGGAACAATTGCATATGAGGAGTTACACTGGCTAGAAGGGAACAATAATTGGGGTGGCATTATTGAAGGACATCAAGTTGAGGTTGCACAACAACAATTTCAGCCAGTTCTTGAAGATGATCACATTGAGCAAATGATACAAGAGTTGCTTGATTGTGGATCAATTGAACTTTGCTCAATTGGGTCAAATTAA 570 0.4 MARPQQRYRGVRQRHWGSWVSEIRHPLLAYDEAARLMCGPKARTNFPFNPNLSQSSSSSSSSSSKLLSPTLTAKLHKCHLASLALQMSNNKQKTSQPNKDPQPPPPPSSSSTSSNNRFNTQFPIGAGTIAYEELHWLEGNNNWGGIIEGHQVEVAQQQFQPVLEDDHIEQMIQELLDCGSIELCSIGSN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0166 189 MobiDBLite consensus disorder prediction 89 119 - -
Amo19g0166 189 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 28 - -
Amo19g0166 189 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 29 185 - -
Amo19g0166 189 ProSiteProfiles AP2/ERF domain profile. 7 39 IPR001471 GO:0003700|GO:0006355
Amo19g0166 189 SUPERFAMILY DNA-binding domain 7 48 IPR016177 GO:0003677
Amo19g0166 189 SMART rav1_2 7 53 IPR001471 GO:0003700|GO:0006355
Amo19g0166 189 PANTHER ETHYLENE RESPONSE FACTOR 29 185 - -
Amo19g0166 189 CDD AP2 6 47 IPR001471 GO:0003700|GO:0006355
Amo19g0166 189 PANTHER ETHYLENE RESPONSE FACTOR 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0166 Amo-Chr19 1795566 1796749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0166 1 186 AP2-EREBP Transcription Factor Family AT5G25190 49.754 8.35e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0166 - - adu:107463739 297.745