Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0151 ATGCCTGCCATTGCCATTGCCGTCGACGCCGCCTCACTGGTTTCCGGCCAAACGGTGTGTGTCACCGGAGCCGGCGGGTTCATAGCCTCTTGGCTTGTTAAGCTTCTCTTGGAGAAAGGCTACACTGTCAAAGGAACACTCAGAAACCCAGATGATCCAAAGAATGAGCATCTGAGAGAGTTGGAAGGAGCAAAGGAAAGGTTAACTCTGCACAAAGTTGATCTGCTTGATTTTGAATCTGTTAAGTCTGTTTTTCATGGCTGCCATGGAATCTTCCACACAGCTTCTCCAGTCACTGACAACCCTGAAGAGATGGTGGAACCAGCAGTGAATGGAACAAGGAATGTGATAATGGCAGCTGCAGAAGCAAAAGTGAGGCGCGTGATTTTCACTTCCTCCATTGGAACAGTTTATATGGACCCCAAAACCAGCAGGGATCAAATTGTTGATGAATCATCTTGGAGTGATTTGGAGTATTGCAAGAACACTAAGAATTGGTATTGCTATGGGAAGACAGTGGCTGAACAAACAGCATGGGAAATATCAAAAGAGAAAGGAGTTGAACTAATTGTGGTGAACCCAGTTTTGGTGCTAGGTCCATTGCTACAATCAACCATAAATGCAAGCACAATTCACATCCTAAAATACCTAACAGGATCAGCAAAGACATTTGTGAATGCTGCTCAGGCTTATGTCCATGTTAAGGATGTTGCATTGGCACACCTTCTTGTGTATGAGACACCTACTGCCAATGGTAGATACATTTGTGCTGAGAGTTCCTTACACCGTGGAGAAGTTGTTGCAATTTTAGCCAAGTATTTTCCTGAGTACCCTATTCCTACCAAATGTTCAGATGAGAAGAACCCAAGAGTAAAACCCTACATATTTTCAAATCAAAGGCTCAAAGATTTGGGAATGAAATTCACCCCAGTGAACTTGTGTCTCTATGAAACTGTCAAGAATCTTCAGGACAATGGCCACCTTCCTCTTCCTCCAAATCACTTTTAA 1008 0.4365 MPAIAIAVDAASLVSGQTVCVTGAGGFIASWLVKLLLEKGYTVKGTLRNPDDPKNEHLRELEGAKERLTLHKVDLLDFESVKSVFHGCHGIFHTASPVTDNPEEMVEPAVNGTRNVIMAAAEAKVRRVIFTSSIGTVYMDPKTSRDQIVDESSWSDLEYCKNTKNWYCYGKTVAEQTAWEISKEKGVELIVVNPVLVLGPLLQSTINASTIHILKYLTGSAKTFVNAAQAYVHVKDVALAHLLVYETPTANGRYICAESSLHRGEVVAILAKYFPEYPIPTKCSDEKNPRVKPYIFSNQRLKDLGMKFTPVNLCLYETVKNLQDNGHLPLPPNHF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0151 335 CDD FR_SDR_e 19 305 - -
Amo19g0151 335 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 12 330 - -
Amo19g0151 335 Pfam NAD dependent epimerase/dehydratase family 19 250 IPR001509 -
Amo19g0151 335 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 330 - -
Amo19g0151 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 321 IPR036291 -
Amo19g0151 335 Gene3D - 8 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0151 Amo-Chr19 1572714 1578180 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0151 13 282 Monolignol Biosynthesis Gene Families AT1G80820 71.481 1.46e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0151 K09753 - gmx:100799994 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0151 19 1572714 1578180 Amo19g0173 19 1861174 1863976 PCT
Amo19g0173 19 1861174 1863976 Amo19g0151 19 1572714 1578180 PCT