Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0143 ATGGATCTGAAAAACGAGATGGAGATCAAGTTGTCGAACAGCGCTAGGACGGTGATATTCAACAAGTACGAGATGGGACGCGTGTTAGGTCAGGGGAATTTTGCCAAGGTATACTACGGCAGGAACCTAGCGACGAACGAAAGTGTGGCGATTAAGGTGATAAAGAAGGATAAGCTGAAGAAGGAGAGGCTGATAGAGCAGATTAAGAGAGAGGTTTCGGTTATGAGGCTGGTGAGGCATCCGAACATAGTGGAGCTGAAGGAAGTCATGGCCACGAAGGGGAAGATATTCTTGGTTATGGAGTATGTTAAGGGAGGCGAATTGTTCAAGAAAGTGGAGAAAGGGAAGCTCAAGGAAGATGTAGCTAGAAAGTATTTTCAGCAGTTGATCTCGGCCGTTGATTTCTGCCATAGCCGCGGGGTCACTCACAGAGATCTCAAGCCGGAGAATCTGCTGCTTGATGAGAATGAAGAGCTTAAGGTCTCCGATTTTGGCCTCTCTGCTTTGCCGGAACAACGCCGTGCAGATGGTATGCTGATAACACCGTGTGGAACACCTGCATATGTGGCACCAGAAGTGTTGAAGAAGAAAGGGTATGATGGATCCAAAGCAGATATATGGTCTTGTGGAGTGATTCTTTATGCTCTGGTTTGTGGCTATCTACCCTTCCAAGGCGAAAACGTGATGAGAATCTACAGAAAAGCCTTCAAGGCTCAGTATGAATTCCCTGATTGGGTTCCGGAAGGAGCAAAGAACTTGATCTCAAACCTACTTGTAGCTGATCCTGAAAAGAGGTTCTCAATTGCAGATATCATGAAGGATCCTTGGTTCCAAGTCGGCTTCATGCGTCCGATTGCATTCTCCTTTAAGGAGTCTGCCATTGGGGACAATGTGGATGACTTCGATGAGGATGATGGTGATAGTAATAACAATCAAGAGTTTAACAAGGATGATTTGAAGCAGAGTAGTTCTGCTAAGCCTGCACGGCCGTTTTACAATGCTTTCGAGATAATTTCCTCGCTGTCGCATGGTTTTGATCTGAGGAGTTTGTTTGAGACAAGGAAGAGGTCACCTTCAGTGTTTATATCAAAGCTTTCGGCTCAAGCAGTGGTGGGGAAGCTAGAGGCTATGGCGAAGAAATTGAATTTCAGAGTGGCCGGGAAGAAGAAGAAGGAGTTTGTTGTGAGGATGGAAGGGGAGAGGGAAGGGAGGAAAGGGAGGCTGGCCATGACGGTGGAAGTGTTCGAGGTGGCGCCGGAGGTGGCCGTGGTGGAGTTCTCGAAGTCTTCTGGGGATACCTTGGAGTATATCAAATTCTGTGAGGAAGAAGTTAGGCCTTCATTGAATGACATTGTTTGGAGTTGGCAGGGAGATGGTAACAACTAA 1386 0.469 MDLKNEMEIKLSNSARTVIFNKYEMGRVLGQGNFAKVYYGRNLATNESVAIKVIKKDKLKKERLIEQIKREVSVMRLVRHPNIVELKEVMATKGKIFLVMEYVKGGELFKKVEKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEELKVSDFGLSALPEQRRADGMLITPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALVCGYLPFQGENVMRIYRKAFKAQYEFPDWVPEGAKNLISNLLVADPEKRFSIADIMKDPWFQVGFMRPIAFSFKESAIGDNVDDFDEDDGDSNNNQEFNKDDLKQSSSAKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSVFISKLSAQAVVGKLEAMAKKLNFRVAGKKKKEFVVRMEGEREGRKGRLAMTVEVFEVAPEVAVVEFSKSSGDTLEYIKFCEEEVRPSLNDIVWSWQGDGNN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0143 461 MobiDBLite consensus disorder prediction 300 325 - -
Amo19g0143 461 Pfam NAF domain 331 385 IPR004041 GO:0007165
Amo19g0143 461 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Amo19g0143 461 PANTHER CBL-INTERACTING PROTEIN KINASE 16 14 459 - -
Amo19g0143 461 Gene3D Phosphorylase Kinase; domain 1 14 102 - -
Amo19g0143 461 CDD CIPK_C 333 449 - -
Amo19g0143 461 ProSiteProfiles NAF domain profile. 327 352 IPR018451 GO:0007165
Amo19g0143 461 PANTHER - 14 459 - -
Amo19g0143 461 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0143 461 Gene3D Transferase(Phosphotransferase) domain 1 103 280 - -
Amo19g0143 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Amo19g0143 461 SUPERFAMILY Protein kinase-like (PK-like) 19 351 IPR011009 -
Amo19g0143 461 Coils Coil 51 71 - -
Amo19g0143 461 MobiDBLite consensus disorder prediction 309 323 - -
Amo19g0143 461 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0143 461 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0143 461 Gene3D Kinase associated domain 1, KA1 328 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0143 Amo-Chr19 1494598 1497736 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0143 16 461 CBL-interacting serine-threonine protein kinases AT5G10930 62.889 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo19g0143 Pkinase 4.4e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0143 - - lja:Lj3g3v2118210.1 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0143 19 1494598 1497736 Amo19g0143 19 1494598 1497736 ECH