Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0124 ATGAAGTTGACAGGCCTTTCAGTTGAGGAAGCTATTGGAAAGGATTTACTTATGCTGGTTGAGGATTTTTCAGCAGAGAGAGTCAAGAAGATGCTGGACATGGCACTGCAGGGCCAAGAAGATTACAATAGATTAAGACCTTTAAGCTATCGAGGAGCTGATGTATTCCTGCTAGCATTCTCTCTCATAAGCAGGGCTAGCTATGAAAATGTTGCCAAGAAATGGATTCCTGAGTTGAGGCATGTTCCAATTATTCTTGTTGGAACAAAACTTGATCTTCGGGATGATAAGCAGTTTTTTCAAGATCATCCTGGTGCAGCGCTTATCACCACAGTGCAGAATGTGAAGGCTGTTTTTGATGCGGCCATCAAAGTAGTTCTCCAGCCTCCAAAGCAGAAGAAAAAGAAGAGAAAGGGTCAAAAAATATGTTCCATATTGTGA 441 0.4172 MKLTGLSVEEAIGKDLLMLVEDFSAERVKKMLDMALQGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHVPIILVGTKLDLRDDKQFFQDHPGAALITTVQNVKAVFDAAIKVVLQPPKQKKKKRKGQKICSIL* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0124 146 Pfam Ras family 31 99 IPR001806 GO:0003924|GO:0005525
Amo19g0124 146 PANTHER RHO FAMILY GTPASE 37 113 IPR003578 GO:0005525|GO:0007264
Amo19g0124 146 ProSiteProfiles small GTPase Rho family profile. 1 146 - -
Amo19g0124 146 SUPERFAMILY PYP-like sensor domain (PAS domain) 2 54 IPR035965 -
Amo19g0124 146 PANTHER BNACNNG35340D PROTEIN 113 146 - -
Amo19g0124 146 ProSiteProfiles PAS repeat profile. 1 39 IPR000014 -
Amo19g0124 146 PANTHER RHO FAMILY GTPASE 113 146 IPR003578 GO:0005525|GO:0007264
Amo19g0124 146 PANTHER BNACNNG35340D PROTEIN 37 113 - -
Amo19g0124 146 SMART rho_sub_3 11 129 IPR001806 GO:0003924|GO:0005525
Amo19g0124 146 SMART rab_sub_5 19 129 - -
Amo19g0124 146 Gene3D - 21 146 IPR027417 -
Amo19g0124 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 138 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0124 Amo-Chr19 1190342 1201727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0124 2 43 Histidine Kinase Gene Family AT1G09570 64.286 8.88e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0124 K04392 - gmx:100785464 166.007