Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0113 ATGAAGATGAAGATGCYCCATTATTACTACTCATTGTGTGCAATGTTGCTTCTTGTGATTTCAGGCACCACTGTGGTYACAGCCACAGACCACATTGTTGGTGCAAACCGTGGCTGGAACCCTGGCATGAACTACACTCTTTGGGCCAATAACCACACTTTCTATGTTGGTGACCTCATTTCATTTAGGTACCAGAAGACACAGTACAATGTGTTTGAAGTGAACCAAACTGGCTATGATAACTGCACTACAGATAGTGCTGTTGGGAATTGGAGCAGTGGCAAGGATTTCATACCCTTAAATAAGGCCAAGAGATACTACTTTATTTGTGGCAATGGACAATGTTTCAATGGGATGAAGGTCTCTGTTCTTGTTCATCCTCTTCCGCCTCCTCCTTCGGCCGCTGTGGCCGCCGAACATTCGACAAAGTCAGCTTCTCCTCCTCCTGTGCTCTTGGATTGGGGACTCTACTCTTTAATAGTGTCTATTGTTTTACACTTTTATTTCGGTTTAGATTGGATTGGATTTAGTTAA 534 0.4345 MKMKMXHYYYSLCAMLLLVISGTTVVTATDHIVGANRGWNPGMNYTLWANNHTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTTDSAVGNWSSGKDFIPLNKAKRYYFICGNGQCFNGMKVSVLVHPLPPPPSAAVAAEHSTKSASPPPVLLDWGLYSLIVSIVLHFYFGLDWIGFS* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0113 177 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Amo19g0113 177 Pfam Plastocyanin-like domain 39 119 IPR003245 GO:0009055
Amo19g0113 177 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Amo19g0113 177 Gene3D - 27 128 IPR008972 -
Amo19g0113 177 PANTHER OS09G0557900 PROTEIN 12 161 - -
Amo19g0113 177 PANTHER BLUE COPPER PROTEIN 12 161 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0113 Amo-Chr19 1089660 1090965 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0113 26 135 Phytocyanin Superfamily AT5G15350 46.429 7.79e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0113 - - adu:107463738 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0113 19 1089660 1090965 Amo19g0113 19 1089660 1090965 ECH