Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0111 ATGGCAGACCTGAAAGATCCACTTCTCCCTCCAAAACTGGCAACGACCATCAAYRTAAGAGAGGCTGTGAATCGGCCTATGGGTGCCGGACGGCAGCTGTATCAAGGAGTGGATGTTCTTGAGCTGAAGAAGAGAGGGCAGAGTCTTCGGTCGTGGATACGAGTTGAYATGTCAGGAGACTCRCAGATAATTGAGGTAGACAAGTTTACTATGATGAGGCGTTGTGATCTTCCAGCGCGCGATCTTCGCCTATTGGATCCACTTTTTGTCTATCCATCAACAATCCTTGGAAGGGAAAAAGCTATTGTTATCAACTTAGAACAGATAAGGTGTATTATTACGGCCGAGGAGGTTTTTCTCCTGCATTCCTTGGACAGTTATTCATGGAACTATGTGATGGAGCTACAACGACGATTAGCATCGACCAGTGTTGGCGAGCCAGGAGATGTGTGGCAGTCAGACAATTTTGATGTGAACCGGAGCAGAGGAAGTAGGAATTTCGATAATGACTTTAGGAATAACTCGTCCCCGGATGACTTGCCATTTGAGTTCAGGGCACTGGAAGTTGCATTAGAGTCAGCATGCACATTTCTTGACTCTCAGGTGTCTGAGTTAGAAATTGAGGCTTATCCGTTGTTGGATGAACTAACATCTAAAATCAGTACTCTGAATTTGGAGCGTGCTCGTCGGCTGAAAAGCAGACTCCTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAGATGTATCTTACTGAGAAGAAAAGGCGAATGGAGTCATCATTCTRTGGAGATCAGTCTTTGTTTAAATCAATTGATGSCGTATCCATATCTGCTCCGGTTTCTCCTGTTTCGTCGCCTCAGGMTTATCGGAAACTTGAAAAGAGCATGAGCAGYGCTAGGAGCCGACATGAGAGCACGAGAAGTTCTGATAGTGCTACAGAAAGCATAGAAGAGCTTGAGATGTTACTAGAAGCATACTTTGTAGTAATTGATAGCACTCTAAACAAGTTGACATCGTTGAAAGAGTACATCGACGACACAGAAGATTTCATCAACATTCAACTGGATAACGTTCGGAATCAGCTCATCCAATTCGAGCTGTTGCTCACAACAGCAACATTTGTAGTTGCCATCTTTAGTGTTGTAGCAGGAGTATTTGGGATGAATTTTGATATCTCATTATTTAGGGTTCCTAAAGCATTTCAGTGGGTTCTTATAATCACAGGAATTTGTGGAATCCTCATATTTAGTGCATTTGTGTGCTTCTTCAAGTACAGAAGACTCATGCCCCTTTAG 1338 0.4335 MADLKDPLLPPKLATTINXREAVNRPMGAGRQLYQGVDVLELKKRGQSLRSWIRVDMSGDSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVINLEQIRCIITAEEVFLLHSLDSYSWNYVMELQRRLASTSVGEPGDVWQSDNFDVNRSRGSRNFDNDFRNNSSPDDLPFEFRALEVALESACTFLDSQVSELEIEAYPLLDELTSKISTLNLERARRLKSRLLALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMESSFXGDQSLFKSIDXVSISAPVSPVSSPQXYRKLEKSMSSARSRHESTRSSDSATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFSVVAGVFGMNFDISLFRVPKAFQWVLIITGICGILIFSAFVCFFKYRRLMPL* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0111 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 445 IPR039204 -
Amo19g0111 445 CDD Mrs2_Mfm1p-like 52 442 IPR039204 -
Amo19g0111 445 Pfam CorA-like Mg2+ transporter protein 324 440 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo19g0111 445 Gene3D Magnesium transport protein CorA, transmembrane region 383 442 - -
Amo19g0111 445 Gene3D Magnesium transport protein CorA, transmembrane region 130 376 - -
Amo19g0111 445 MobiDBLite consensus disorder prediction 309 324 - -
Amo19g0111 445 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 382 433 IPR045863 -
Amo19g0111 445 Gene3D - 37 123 - -
Amo19g0111 445 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 445 - -
Amo19g0111 445 MobiDBLite consensus disorder prediction 301 324 - -
Amo19g0111 445 Coils Coil 228 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0111 Amo-Chr19 1082362 1084736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0111 1 445 MRS2 Gene Family AT1G16010 77.902 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0111 K16075 - gmx:100801387 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0111 19 1082362 1084736 Amo19g0111 19 1082362 1084736 ECH