Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0107 ATGCATTTCTTCTTGTTTCGGTTTGGAAAATTGAAGATGATCATAAAGGTGAGAGAATCGACAATGGTGCGTCCGGCGGAGGAAGGACCGAGAAGGACGCTGTGGAATTCGAACGTGGATTTGGTGGTACCGAACTTCCACACGCCTAGCGTGTACTTCTACCGTCCGAACGGCGCGTCGAACTTCTTCGACGCTAAGATCATGAAGGAAGCGCTGAGCAAGGTTCTGGTGCCGTTTTATCCGATGGCTGGGAGGCTCCGACGCGACGAGGACGGCCGCGTGGAGATCGATTGCGACGGTCAAGGGGTTCTGTTCGTGGAGGCGGAGACCGGCGGCGTCATCGACGATTTTGGGGATTTCGCGCCAACGCTTGAGCTTCGGCAACTAATCCCAGCCGTTGATTACTCACAAGGGATTGAATCCTATCCACTCTTGGTACTCCAGGTAACATATTTTAAATGTGGAGGGGTGTCATTAGGAGTTGGCATGCAGCACCATGCAGCGGATGGAGCTTCTGGTCTTCACTTCATCAACACATGGTCCGATGTAGCTCGCGGCCTTGAGGTGTCAATCCCACCATTCATCGACCGGACACTGCTCCGAGCAAGAGATCCGCCTCGGCCAGTCTTTGATCACATTGAATACAAGCTCCCACCATCCATGAAAACACAAGCAGTATCACAGCAACAACCTCAAAAACCAGGATCAGATGCTGCAGAGGTTTCTATTTTCAAGCTGACACGTGATCAACTGAACAAGTTGAAAGCAAAGTCTAAGGAAGATGGTAACACTGTGAGTTACAGCTCTTATGAGATGTTGGCTGGTCATGTTTGGAGGAGTGTGTGCAAAGCAAGGGGACTTCCAATGGATCAAGAAACAAAGTTGTATATTGCGACAGATGGAAGGTCTAGGCTGCAGCCTCCGCTTCCTCCGGGCTACTTTGGCAATGTGATATTCACAACAACACCGATCGCTGTGGCCGGAGATCTCATGTCAAAGCCTATTTGGTACTCTGCAAGCAGAATCCACAATGCTCTGTTGAGGATGGACAATGACTATTTGAGGTCTGCTCTTGATTACTTGGAGCTGCAGCCGGATCTCAAGGCGCTGGTTCGCGGCGCTCACACTTTCAAGTGTCCGAATCTCGGCATCACTAGCTGGGTTAGGCTTCCAATCCATGATGCTGATTTTGGTTGGGGGAGGCCTATTTTCATGGGGCCTGGAGGGATTGCCTATGAAGGATTGTCTTTCATAATTCCGAGTTCAACGAATTGTGGGAGCTTGTCTGTGGCAATTGCTCTTCAGCCTGATCACATGAAGGTGTTCAAGGAATTGATCTATGACATTTGA 1350 0.5 MHFFLFRFGKLKMIIKVRESTMVRPAEEGPRRTLWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAKIMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEAETGGVIDDFGDFAPTLELRQLIPAVDYSQGIESYPLLVLQVTYFKCGGVSLGVGMQHHAADGASGLHFINTWSDVARGLEVSIPPFIDRTLLRARDPPRPVFDHIEYKLPPSMKTQAVSQQQPQKPGSDAAEVSIFKLTRDQLNKLKAKSKEDGNTVSYSSYEMLAGHVWRSVCKARGLPMDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAVAGDLMSKPIWYSASRIHNALLRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNCGSLSVAIALQPDHMKVFKELIYDI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0107 449 Pfam Transferase family 15 445 - -
Amo19g0107 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 448 - -
Amo19g0107 449 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 16 448 - -
Amo19g0107 449 Gene3D - 10 217 IPR023213 -
Amo19g0107 449 Gene3D - 228 449 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0107 Amo-Chr19 1037323 1042717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0107 13 449 Monolignol Biosynthesis Gene Families AT5G48930 78.032 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0107 K13065 - gmx:100820075 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0107 19 1037323 1042717 Amo19g0107 19 1037323 1042717 ECH
Amo19g0107 19 1037323 1042717 Amo19g0107 19 1037323 1042717 PCT