Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0090 ATGAAGGAGAGGTTTTGTGAGCTCTGCAAGGAAAAAGCTTCTCTCTACTGCGCCTCTGACTCCGCCTTCCTTTGCTGGAAATGCGACGCCACCGTTCATAATGCCAACTTCCTCGTCGCTCGCCACCGCCGCCGCCTCCTCTGTTTCAACTGCAATTCCTTCGCCGGAGTCCACATCTCCGGCGCCTCGTCTCGCCGCACCGCCGCCAACTGCCGATCCTGCTCCCCGACGGAGATTCATTACTCCGACGAGGAGGAGGAGGAGGAGGAGGAGGACAATTCCCTCTGTTCTTCACCTCCTTCTTCCTCGTCCTCCTCCTCTGCATGCGTTTCCAGCTCGGAGCCACGCGCCGGCAACAAGATCAGAACAAAATACTTGCCGGAAAAGAGAATCAGAACGGTAACCTCTTCCGGTTCGGCGGTTACGACGGACGACGATGATTTTTCAACGCCGAAGCAAAAGCGGCAGAGGAATAACAAGAAGAAGAATAGTAATGGCGGTGGATCTGGTTCCGATGAGGTAAGAACGGCGTCGGCGAAAGAGTATTCAGTGTTCGCGAAATGGAGCGAGGAATTAGGGTTGGGATTAAACGAGGGGAGACGCGTGTCGTGCGTGGCGTGCAGAGCGTTGAGAGTATGGGTGAGAAAATGGAAGGGAGTTGGTATTCCGTATAAGGTGGGTGCTGCGACGTCGTTTTGGTTAGGTTTGAGATTTTGTGGGATGACGTTCGAGAATCTGCGGAGATTGGAAGAGATCTCAGGTGTGCCAGCTAAGCTCATTCTCCAAGCATATGCCATGCTCTCACGTGTCTTCTTCTTCTCCCAACAACAACAAACCACTTCTCCCTTCTTCCATTTGCAAGAAGGCTCTGATGACTCAATTGTTGTTGTTGTTTACTCATTATTGGAGGAGAAGAAGGAGAACAACATTTTAGTCTTAGCAAGGAAATAG 951 0.5174 MKERFCELCKEKASLYCASDSAFLCWKCDATVHNANFLVARHRRRLLCFNCNSFAGVHISGASSRRTAANCRSCSPTEIHYSDEEEEEEEEDNSLCSSPPSSSSSSSACVSSSEPRAGNKIRTKYLPEKRIRTVTSSGSAVTTDDDDFSTPKQKRQRNNKKKNSNGGGSGSDEVRTASAKEYSVFAKWSEELGLGLNEGRRVSCVACRALRVWVRKWKGVGIPYKVGAATSFWLGLRFCGMTFENLRRLEEISGVPAKLILQAYAMLSRVFFFSQQQQTTSPFFHLQEGSDDSIVVVVYSLLEEKKENNILVLARK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0090 316 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 2 266 - -
Amo19g0090 316 SMART bboxneu5 1 47 IPR000315 GO:0008270
Amo19g0090 316 MobiDBLite consensus disorder prediction 95 118 - -
Amo19g0090 316 MobiDBLite consensus disorder prediction 82 174 - -
Amo19g0090 316 MobiDBLite consensus disorder prediction 130 146 - -
Amo19g0090 316 CDD Bbox1_BBX-like 6 47 - -
Amo19g0090 316 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 266 - -
Amo19g0090 316 Pfam B-box zinc finger 2 44 IPR000315 GO:0008270
Amo19g0090 316 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0090 Amo-Chr19 885971 887134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0090 1 74 C2C2-CO-like Transcription Factor Family AT5G54470 50.000 4.17e-16 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo19g0090 zf-B_box 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0090 - - adu:107463828 500.745