Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0054 ATGGAAGGAAAGCAGAACCTCGATGCTGCAAGAAAGTGCTTGCTAGCTAGCTTGGAAACATCAAGTGCTATTGGTTCTGCATTAGATGAGTCTGGATCAAGATTGGAGCTTCTTCGCCAGCGATGTCAATCCCTGCAAACTTCATTCAGACCAATCTCCATGCAGAAATGCTCGTTCATCGACGTTGGCAATGGTATAGATAGTGTTCTATGTTCTGCTGCTACTGTCCTCAAGGTGTTTGAATTTGTGCAGCATTTGGAGAATTCTCTATTGACAGACGCTGGTTCCGATCTATGCTCTTACGTCTCAGATGCCAAGAAGCTTGAAGAAGCCTTGAAGCTTCTCACTGATAATTGCACGTTAGCAATTGGCTGGTTGCAGGGTGTTCTTGACTTCTTACAAGACAAAGCGATCACCAATGAGTTTTACCTCTTTCAGGTGAAGAAATCCTTGAGGATACTGCGAGAATTGCAAGCCGTGGAAGAGGGAGCTCGCGTCAATGGAGGTTTTCTCAGCGCAGCCTTAGACAATCTAGAGACYGAGTTCCAAAGACTTCTGATGGCAAACTCAATGCCCATTCCTTTGGTTTCGTTAGGATCACACGTCGCAACACAAGCTTTGCCAGGTTCTGTTATGGGGAAGTTGCAGGCCATCATTGAGAGGTTAAATGCAAACAGCAGGCTAGACAAGTGTAAATCTATATATGTTGAAGTTCGAGGGAGGAATGCTCAAAGAACTTTGAACACTTTAGACTTGAGCTACCTTGAGATTCCAACAGCTAAATTTGAGGATGTCAGGGAAATAGCGAGTTACATAGACCAATGGGGCATTGATTTGGAGTTGGTTGTCAAGAACGTGCTTGATGCTGAGTACATGCTATCTTGCCGTGTCTTTGAGAAGATTGGTCGAGAAGCATCAGCCGAGTGTTTTGCCAGGATCGCCATCAGATCAGGAATTCTTTCTTTCATTCTATTTGGAAGGAATGTTTCGGAGAGTAGAAACGATCCCTACAAGTTGTTGAACCTGCTGGACATATTCAGTGTGTTAGATGATCTTAGACTAAAATTCAACCAACTTTTTGGGGGGAAGGCCTGTGAAGAAATTAGAATCGCGACAAAGGATCTTGTCAACAAAGTTGTTAATGGTGCCTGTGAGATATTCTGGCAACTTCCGGCGCAAGTGAAGCTGCAAAGGCCAAGTTCTCCTCCCCGAGATGGCGGTGTCCCTAGGCTGGTAAGCTTTGTAACTGATTACTGCAATCAGCTGCTTAATGATACATATCTACCACATTTGAAAAAGGTCCTAGAAATTCATCTTAGTTGGAGAAATGAAACATATGAAGAGGGTATTGTTTTCACACAAATATATGATACAATCAAGGAAGTTGCAGTTAATCTTGATTCTTGGTCAAAGGCCTATGAAGATATCACATTGTCCTACATTTTCATGATGAATAATCATTGCCATTTCTACAATTTGAGGGGTACCATGCTTGGGGATACGATGGGAGATACTTGGTTAGGAGCACATGAACAATACAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGGGGAAAGCTTCTATCAATTATTGTTCAAAAAGACTTACTTTCATCCTCATTGAGTAGCCAAGATTTGGGAAAGAGATTGCATGCTTTCAATGTAGCTTTTGATGAGAGGTACAAGAAGGAATCTAGTTGGACAATTTGTGATGARGCCTTGAGGAAAAACATWTGCAAGCATTTGGTGGAATGTATTGTACCAATCTATAAGGCCTATGTGAAGAATTACAACTTGTCAATCGAGAATGAAGGTATGGTTGCAAAGCATATCAAATATACAGCAGAGAGTTTGGAGAATAAGATTTGGTCTATGTTTCAGCCAAAGCTGAAGAAGAATGGGAGTGTCAAGCATGCAGATTGGACTAGTAAAATAAAACAAGTTAGCAAAAGTTTTCGCTTCACTCTAGCTGCTAAGTAG 1986 0.4164 MEGKQNLDAARKCLLASLETSSAIGSALDESGSRLELLRQRCQSLQTSFRPISMQKCSFIDVGNGIDSVLCSAATVLKVFEFVQHLENSLLTDAGSDLCSYVSDAKKLEEALKLLTDNCTLAIGWLQGVLDFLQDKAITNEFYLFQVKKSLRILRELQAVEEGARVNGGFLSAALDNLETEFQRLLMANSMPIPLVSLGSHVATQALPGSVMGKLQAIIERLNANSRLDKCKSIYVEVRGRNAQRTLNTLDLSYLEIPTAKFEDVREIASYIDQWGIDLELVVKNVLDAEYMLSCRVFEKIGREASAECFARIAIRSGILSFILFGRNVSESRNDPYKLLNLLDIFSVLDDLRLKFNQLFGGKACEEIRIATKDLVNKVVNGACEIFWQLPAQVKLQRPSSPPRDGGVPRLVSFVTDYCNQLLNDTYLPHLKKVLEIHLSWRNETYEEGIVFTQIYDTIKEVAVNLDSWSKAYEDITLSYIFMMNNHCHFYNLRGTMLGDTMGDTWLGAHEQYKDYYAALYLRNSWGKLLSIIVQKDLLSSSLSSQDLGKRLHAFNVAFDERYKKESSWTICDEALRKNICKHLVECIVPIYKAYVKNYNLSIENEGMVAKHIKYTAESLENKIWSMFQPKLKKNGSVKHADWTSKIKQVSKSFRFTLAAK* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0054 661 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 651 IPR004140 GO:0000145|GO:0006887
Amo19g0054 661 SUPERFAMILY Cullin repeat-like 76 628 IPR016159 -
Amo19g0054 661 Gene3D Exocyst complex component Exo70 133 636 - -
Amo19g0054 661 Pfam Exo70 exocyst complex subunit 275 624 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo19g0054 661 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0054 Amo-Chr19 632566 634611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0054 3 648 EXO70 exocyst subunit family AT4G31540 47.289 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0054 K07195 - adu:107471547 1063.14