Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0044 ATGTTGGAGAATAAAATTCTGGTGAAGAAACCTAGATCTAGTATCAGTCCGTTCCCTCTGTCTGCAGCTACCCGCTCCACTCACCGCCGCGTCCATTCTCTTCTCCACCGCGTCCATTCTCCTCTGCCGCTGCTCCGTGCTCTCCTCTTTGCCATTGCTCCGTTCTCGCGTCCGCTCGAAAGAAGCCGCCGGTCGTACCTCCTCCTCCTCTTCCACTTCAGAGCCGGATTCCACACCTCTACAGCTGTCCCTACAGCTGCACTGCTGGTCAACACCACTGCAGCCACCTTCATTTTCTGCACCACACACAAAAAATTAGTCAAATTGAGTGGACTGAAAATGGATGAGGCAGAGGCAAATACAGCAGTGCAAGCACTGCCTGAAATGATGTCAGCGAATGTGGAAGCCTTGCTTGAGGCCGCGAGGTATGATGACATGGATGATGTTGTGATCTTAGCATCTAATGGTGTTCCTCTTGATTCCAAGGATGAACAGGGTAGGACAGCTCTTCATATGGCTGCTGCTAATGGGCATATTGAAATTGTGGAGTACTTAATTGGTCAAGGTGTGGTGTTGTGGATTGCAGATGATGACATAACAGTGGAGTTGTTTGGCCATGAGAGCCGAGAGGGACCTGGAGTTGGCGAGGGGGTGAAGCAAGGTTCCAAAATGGAGAGAAGGGGGAGGAAAAGTATGGGATGTGCGAGAAGGAGGGATCTTAATGTTGCAAACGAGGAAAAGAATACACCTCTTCACTGGGCTTGTCTCAATGGACATGTTGAGGTTGTGAAAAAGTTAATCATGGCTGGAGCTAATGTTGGTGTTTTGAACAGTCATGAGAGGACTCCAATGGATGAAGCTGTTACTAGAGGCAAACTAGAAGTGATGGATGCAATTAATGAAGCAGTCGCACTAGTTGAACTTCGTTGCGCAATGGTTTCTACACAAGAACCTTCAAGTTAA 963 0.4839 MLENKILVKKPRSSISPFPLSAATRSTHRRVHSLLHRVHSPLPLLRALLFAIAPFSRPLERSRRSYLLLLFHFRAGFHTSTAVPTAALLVNTTAATFIFCTTHKKLVKLSGLKMDEAEANTAVQALPEMMSANVEALLEAARYDDMDDVVILASNGVPLDSKDEQGRTALHMAAANGHIEIVEYLIGQGVVLWIADDDITVELFGHESREGPGVGEGVKQGSKMERRGRKSMGCARRRDLNVANEEKNTPLHWACLNGHVEVVKKLIMAGANVGVLNSHERTPMDEAVTRGKLEVMDAINEAVALVELRCAMVSTQEPSS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0044 320 ProSiteProfiles Ankyrin repeat region circular profile. 165 190 - -
Amo19g0044 320 SMART ANK_2a 279 308 IPR002110 GO:0005515
Amo19g0044 320 SMART ANK_2a 246 275 IPR002110 GO:0005515
Amo19g0044 320 SMART ANK_2a 165 196 IPR002110 GO:0005515
Amo19g0044 320 Pfam Ankyrin repeats (many copies) 238 287 IPR002110 GO:0005515
Amo19g0044 320 PRINTS Ankyrin repeat signature 262 276 IPR002110 GO:0005515
Amo19g0044 320 PRINTS Ankyrin repeat signature 166 181 IPR002110 GO:0005515
Amo19g0044 320 MobiDBLite consensus disorder prediction 210 231 - -
Amo19g0044 320 ProSiteProfiles Ankyrin repeat profile. 246 278 IPR002110 GO:0005515
Amo19g0044 320 ProSiteProfiles Ankyrin repeat region circular profile. 246 277 - -
Amo19g0044 320 Gene3D - 231 305 IPR036770 -
Amo19g0044 320 Pfam Ankyrin repeats (many copies) 135 186 IPR002110 GO:0005515
Amo19g0044 320 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 118 192 - -
Amo19g0044 320 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 236 314 - -
Amo19g0044 320 Gene3D - 127 200 IPR036770 -
Amo19g0044 320 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 118 192 - -
Amo19g0044 320 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 236 314 - -
Amo19g0044 320 ProSiteProfiles Ankyrin repeat profile. 165 197 IPR002110 GO:0005515
Amo19g0044 320 SUPERFAMILY Ankyrin repeat 134 298 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0044 119 186 MAP Kinase Kinase Kinase AT2G31800 36.765 1.38e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0044 - - gmx:100306615 226.098