Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0028 ATGTGTGACTTCATAGGTTCAACACTAAGCGGATATGCTCAATTTAAGTTTGGGAGTCTCGAGCAAGACACTGGTAATTCCCGAATTGCATCTCCAGCTACTAAGCAATTTTTGGCACTAGAAAGAAAAGTGTTAGCAGTTATTGAGTTTAGAACTGCTACTGCTGAAGGTAGAACTATTGAGCAAAAAGTCTTGGAGTACAAGTTAAGACATCCAAAAACATTTCATTATCTGAACCAATCAAATTGCTATGAGTTAGAAGGGATTGACGAACATAAAGAATATATAGCTACAAGGAGAGCAATTGATGTTATTGGAATGAGTTCTGAGGAACAGAGTATTGCTATAGAATATCTATGGTAA 363 0.3636 MCDFIGSTLSGYAQFKFGSLEQDTGNSRIASPATKQFLALERKVLAVIEFRTATAEGRTIEQKVLEYKLRHPKTFHYLNQSNCYELEGIDEHKEYIATRRAIDVIGMSSEEQSIAIEYLW* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0028 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 114 IPR027417 -
Amo19g0028 120 Gene3D - 50 106 - -
Amo19g0028 120 PANTHER MYOSIN-6-LIKE ISOFORM X1 65 113 - -
Amo19g0028 120 PANTHER MYOSIN 65 113 - -
Amo19g0028 120 Pfam Myosin head (motor domain) 61 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0028 Amo-Chr19 344781 347767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0028 61 112 Myosins gene family AT1G04600 63.462 1.79e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0028 K10357 - csin:114317632 84.7297