Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0016 GAACATAAGGGACGTGTTTTTAAAATGGAGTCCCCAACGAAGAGCTCACTTCAGCTGGAGACGGCTACAACCACGAATATTACACCCATTTTGAAGATTATTTCAGTTGCATCCGTTGCTGCTGGCATCCAGTTTGGGTGGGCCCTACAACTCTCCCTCCTCACACCATACGTCCAACTGTTGGGGGTCCCACACGTGTGGGCCTCCTTCATTTGGCTGTGTGGTCCCATCTCCGGGATGGTAGTCCAGCCCATTGTGGGATACTACAGTGATCGTTGCAACTCAAGACTCGGCCGCCGTAAACCTTTTATCATCACTGGAGCCCTTTCTGTCATCATCGCCGTCTTTCTCATCGGATACGCTGCTGACCTCGGTCACTCCTTCGGCGATGACATTACGAAGAAAACCCGCCCTCGAGCTGTTGCCATATTCGTCATCGGCTTTTGGGTTCTAGACGTGGCCAACAATATGCTCCAAGGGCCTTGCCGCGCCTTCTTGGGCGACCTGTCTGCCGGAGACGAAGGCAAGATCCGAATGGCCAATGCCTTCTTCTCCTTCTTCATGGCGATAGGTAACATCCTCGGCTACGCGGCAGGTTCATATGAAAATCTACACAAAGCATTTCCGTTCTCGAACACGGAGGCATGCGACAAGTTCTGTGCTAACCTCAAGAGCTGCTTCTTCATCTCCATCCTTCTCCTCCTTACCCTGGCTGGCCTTGCCATGTTCTTCGTTGAAGATGTTCCCCTCTCAGAGGCAAAGAAAAATGAGGACATTGAAGGCACTGAGGACTCTTCTCGTTCGGCAGGATGCTTTGGAGAAATCATCAACTGGATCGGTTGGTTCCCATTCTTCTTGTTCAACACCGACTGGATGGGGAAGGAGGTGTACGGTGGTAACGTGGGTGACGAGGCCTACGACAAGGGTGTCCGCGCTGGATCGTTGGGTTTGATGATAAACGCTATCGTTTTGGCAGTTATGTCATTGGGAGTTGAACCGGCTAGCAATATCATGGGTGGAGCAAAGAACCTTTGGGGTATTGTTAACTTCATCCTTTCCGGTGGATTGCTTTCTACAATTTACATCACCAAGGTTGCCGAGTTTGACCGCCATCGTGCCGGCCATTATGTTCCTCCAGCTACCGGCGTAAGGGTTGGTGCCATGACTTTTTTCGCCGTCATCGGTATTCCACTTGCGATCAATTTCAGCGTTCCATTCGCTCTAGCATCAGTCTACTCAGCCACCAGTGGAGCAGGCCAAGGCTTGTCTCTTGGGGTTCTCAATCTTGCCATTGTGATCCCACAGATGATAGTGTCAACAGTGAGTGGACAAGTGGATGCTTGGTTCGGCGGAGGGAACTTGCCTGCATTTGTGATGGGTGCGATAGCGGCGGCTGTGAGTGGTGCAATGGCAATTGTCATGCTTCCGTCCATAAAGAAATCGGATGCAACCAAAGCTTCTATGGTCGTTGGTGGCGGACACTGA 1485 0.5138 EHKGRVFKMESPTKSSLQLETATTTNITPILKIISVASVAAGIQFGWALQLSLLTPYVQLLGVPHVWASFIWLCGPISGMVVQPIVGYYSDRCNSRLGRRKPFIITGALSVIIAVFLIGYAADLGHSFGDDITKKTRPRAVAIFVIGFWVLDVANNMLQGPCRAFLGDLSAGDEGKIRMANAFFSFFMAIGNILGYAAGSYENLHKAFPFSNTEACDKFCANLKSCFFISILLLLTLAGLAMFFVEDVPLSEAKKNEDIEGTEDSSRSAGCFGEIINWIGWFPFFLFNTDWMGKEVYGGNVGDEAYDKGVRAGSLGLMINAIVLAVMSLGVEPASNIMGGAKNLWGIVNFILSGGLLSTIYITKVAEFDRHRAGHYVPPATGVRVGAMTFFAVIGIPLAINFSVPFALASVYSATSGAGQGLSLGVLNLAIVIPQMIVSTVSGQVDAWFGGGNLPAFVMGAIAAAVSGAMAIVMLPSIKKSDATKASMVVGGGH* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0016 494 Pfam MFS/sugar transport protein 45 197 - -
Amo19g0016 494 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 479 IPR005989 GO:0005887|GO:0008515|GO:0015770
Amo19g0016 494 Gene3D MFS general substrate transporter like domains 31 475 IPR036259 -
Amo19g0016 494 CDD MFS_SLC45_SUC 33 472 - -
Amo19g0016 494 SUPERFAMILY MFS general substrate transporter 34 480 IPR036259 -
Amo19g0016 494 PANTHER SUGAR TRANSPORTER 9 481 - -
Amo19g0016 494 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 9 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0016 Amo-Chr19 169760 171427 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0016 7 477 Sucrose Transporter Gene Family AT1G71890 59.118 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0016 K15378 - gmx:100782007 637.876