Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0015 ATGACCGACTCTGTCCATCTCCTCCGCAAACAAAAGCACTTACTTGTCTGCCATGAATTGAGGACACATATGGCTGCAATAATTGGGCTACTTGACATTCTTATGTCTGACGACTGTCTAACCAACGAACAGTGTGCAACGGTTACTCATATAAGAAAATGCTTGACGGTGCTGTTCCGGCTTCTTAATAACATCCTGGATCTCAGCAAGGTGGAATCAGGAAAGCTAATTCTAGAAGATGCTGAATTCAACTTGGGAAGGGAACTTGAAGGACTAGTGGATATGTTTTCTGTGCAATCCATGAATCACAGTCTAGAGACTGTCTTAGACCTATCTGAGACGGCCCTTGAAAATTCCAAGCAACTAGTAAGGAACTTAGAAACAAAGCTTGACTCAGCTAATGCTCAGCACCTTAAGGAGAAAGAAGAATGGGGACTAAGCCTTAAAAATGTAGAAGAAACGTGGCGAATCAAATGTGACTCAATGAAGGCTGAAAACGAAGCAACTGTTGCACAAGATATGAAAAAGGAGTTGCAAGAGTTCAAACTGCAATATAAAAAATTGAAGGTTGAACATGCTTCATTTCATGATATTGCTGATAAAATGATTGAGGAGAAGGATAATGAAATATCTAGACTTTCAGATGATAATAGGAATCTTCGTCAATCTCTTCAATCAAGACCACATGTTGACCACAGTGACAATGATAATTATAACACAGGTATTAATTCATTTATATCCTGGCAGAAATTGTTCATGGTTTATTAA 768 0.3867 MTDSVHLLRKQKHLLVCHELRTHMAAIIGLLDILMSDDCLTNEQCATVTHIRKCLTVLFRLLNNILDLSKVESGKLILEDAEFNLGRELEGLVDMFSVQSMNHSLETVLDLSETALENSKQLVRNLETKLDSANAQHLKEKEEWGLSLKNVEETWRIKCDSMKAENEATVAQDMKKELQEFKLQYKKLKVEHASFHDIADKMIEEKDNEISRLSDDNRNLRQSLQSRPHVDHSDNDNYNTGINSFISWQKLFMVY* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0015 255 PANTHER OSMOSENSOR HISTIDINE KINASE 16 176 - -
Amo19g0015 255 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 13 75 IPR036097 GO:0000155|GO:0007165
Amo19g0015 255 Pfam His Kinase A (phospho-acceptor) domain 16 74 IPR003661 GO:0000155|GO:0007165
Amo19g0015 255 PANTHER TWO-COMPONENT HISTIDINE KINASE 16 176 - -
Amo19g0015 255 Coils Coil 109 143 - -
Amo19g0015 255 Coils Coil 164 191 - -
Amo19g0015 255 Coils Coil 203 223 - -
Amo19g0015 255 CDD HisKA 16 70 IPR003661 GO:0000155|GO:0007165
Amo19g0015 255 Gene3D - 8 77 - -
Amo19g0015 255 SMART HisKA_10 9 74 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0015 Amo-Chr19 160093 162007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0015 18 113 Histidine Kinase Gene Family AT2G17820 82.292 7.79e-47 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0015 - - aip:107642516 245.358