Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0014 ATGCAACATAACATAACCCCTCATCCGCTTATAAATTCACCAACACTGACCCTGCTCTCTCTCCATTCAAATACTGCACACATCATTCTCCTTTCTTTCTTTTTCTTTTACTGTTTTACATTTCTCGCCATGAGCTCCTCAAACAAGAGCACTATTAAGAATGGTGACACCCATAACTCCCTTCAACTGGAATCGGGGTCACGAGAACAGCCAAGTCCAATCTGGAAGCTGGTGGCGGTGGCCTCCATCGCCGCTGGAATCCAGTTTGGCTGGGCTCTACAGCTTTCCCTCTTAACACCTTATAGCCAGCTTCTTGGAGTACCTCACCAATGGTCTTCTTTCATCTGGCTTTGTGGCCCCATTTCTGGCATGATTGTCCAGCCCATAGTCGGTTATTGTAGTGACAGATGTACATCCAAACTCGGCCGCCGTAGACCTTTTATCCTTGCAGGCGCCGCTGCCGTTGCCATAGCTGTTTTTCTCATTGGCTTTGCCGCCGACATCGGCCACGCCTTTGGGGACAACCTGACCAAGAAAACCCGTCCACGCGCCGTAGCCATTTTTGTGATCGGATTCTGGATCTTGGACGTGGCGAACAACATGCTCCAAGGCCCCTGTCGAGCGTTTCTTGGTGACCTTGCCGCGGGAGACGAACGGAAAACGAGATTGGCAAATGCGTTTTTTTCATTCTTTATGGCAGTAGGAAGCGTATTGGGTTACGGCGCGGGTTCCATTAACAGCCTCCACAAAGTGTTCCCATTCACGCAAACAAAAGCGTGTGATGTGTTCTGCGCAGACTTGAAAAGCTGCTTCTTCTTCTCAATCCTCTTGCTACTGGTGTTAACCGGTGTGGCTCTGTTCTACGTGCAGGACAAGCCCGTATTACGTGAGAAATCACGCGTGGGAGAAGAGGAAGATGAGAGGTCCGCAGTGGTTGCATGCTTCGGAGAAATGTTAGGGGCACTGAAGGGGCTGAAGAAGCCAATGTTATTATTGATGGCAGTTACGGCAATAAACTGGTCGGCGTGGTTCTCATACTTTCTGTACAATACTGATTGGATGGGTAAAGAGGTGTACGGTGGGGAAGTTGGGGATCAAGCGTATAAAGAGGGTGTCCAGAAGGGTGCTTTGGGTCTTTTGATAAACTCAGTGGTTTTGGGTGTTATGTCTTTGGGTGTGGAGCCCATTGGACGTGCGGTTGGTGGTGCCAAGAATCTCTGGGGAATTGTCAATTTAATCCTTGCCGCTGGTTTGGCCATGACTGTTTATATCAGTAAGGCAGCTATGCATGAGCGCCATCTTAACCCGCGCTATATTGGTCATCCCTCCACCGCCGTTCAGGCTGGAGCCTTGTCCTTCTTTGCCATTCTTGGCATTCCCCTTGCGATAACATTTAGCATCCCATTTGCACTAGCATCCATCTACTCAAGTGAAACGGGTGCAGGACAAGGTTTATCTCTGGGAGTTCTCAATCTTGCAATTGTAATTCCACAGATGATAGTGGCAGCAATCAGCGGACCATGGGACAAATTATTTGGAGGTGGTAATTTGCCGGCGTTTGTAGCAGGTGCGGTGGCGGCTGCCGTGAGTAGCATAATGGCATTTTTTATGTTGCCGTCTACGAAGCAATCAGAAGCGGCTAAAGCTGCACTTCCCATGGGCGATAACGCTGTTCTTGCAAGAGTTGTGTTATGTTCATCGCTTACGTTTACACATGTCATGTTATTATTGGACATTATTATTGAACCGAAAACCAAGAACCGAAGGAAACGGAAGGGACGTGTTTCTAAAATGGAGTCCCCAACGAAGAGCTCACTTCAGCTGGAGACGGCTACAACGACGAATATCACACCCATTTTGAAGATTATTTCAGTTGCATCCGTTGCAGCTGGCATTCAGTTTGGGTGGGCCCTACAACTGTCCCTGCTCACACCATACGTCCAACTGTTGGGGGTCCCACATGTGTGGGCCTCCTTCATTTGGCTGTGTGGTCCCATCTCCGGGATGGTAGTCCAGCCCATTGTGGGATACTACAGTGATCGTTGCAACTCAAGACTTGGCCGTCGTAAACCTTTTATTATCACTGGAGCCCTTTCTGTCATCATCGCCGTCTTTCTCATCGGATACGCTGCTGACCTCGGTCACTCCTTCGGCGACGACATTACGAAGAAAACCCGCCCTCGAGCTGTTGCCATATTCGTCATCGGCTTTTGGGTTCTAGACGTGGCCAACAATATGCTCCAAGGGCCTTGCCGCGCCTTCTTGGGCGACCTGTCTGCCGGAGACGAAGGCAAGATCCGAATGGCCAATGCCTTCTTCTCCTTCTTCATGGCGATAGGTAACATCCTCGGCTACGCGGCAGGTTCATATGAAAACCTACACAAAGCGTTTCCATTCTCGAACACGGAGGCTTGTGACAAGTTCTGCGCTAACCTCAAGAGCTGCTTCTTCATCTCCATCCTTCTCCTCCTTACCCTGGCCGGCCTTGCCATGTTCTTCGTTGAAGATGTTCCCCTCTCAGAGGCCAAGAAAAATGAGGACATTGAAGGCACTGAGGACTCTTCTCGTTCGGCAGGATGCTTTGGAGAAATCGTTGGGGCGTTGAAGGAGCTGAAGAAGCCAATGTGGATCTTAATGCTTGTAACAGCTATCAACTGGATCGGTTGGTTCCCATTCTTCTTGTTCAACACCGACTGGATGGGGAAGGAGGTGTACGGTGGTAATGTGGGTGACGAGGCCTACGACAAGGGTGTCCGCGCTGGATCGTTGGGTTTGATGATAAACGCCATCGTTTTGGCAGTTATGTCATTGGGGGTTGAACCAGCTAGCAATATCATGGGTGGAGCAAAGAACCTTTGGGGTATTGTTAACTTCATCCTTTCCGGTGGATTGCTTTCTACTATTTACATCACCAAGGTCGCTGAGTTTGACCGCCATCGTGCCGGCCATTATGTTCCTCCAGCTACCGGCGTAAGGGTTGGTGCCATGACTTTCTTCGCCATCATCGGTATTCCACTTGCGATAAATTTCAGCGTTCCGTTTGCTCTAGCATCAGTCTACTCAGCCACCAGTGGAGCAGGCCAAGGCTTGTCTCTTGGGGTTCTCAATCTTGCCATTGTGATCCCACAGATGATAGTGTCAACAGTGAGTGGACAAGTAGATGCCTGGTTCGGCGGTGGGAACTTGCCTGCTTTCGTGATGGGTGCGATAGCGGCGGCTGTGAGTGGTGCAATGGCAATTGTCATGCTTCCGTCCATAAAGAAATCTGATGCGGCCAAAGCTTCTATGGTCGTTGGTGGCGGACACTGA 3309 0.4995 MQHNITPHPLINSPTLTLLSLHSNTAHIILLSFFFFYCFTFLAMSSSNKSTIKNGDTHNSLQLESGSREQPSPIWKLVAVASIAAGIQFGWALQLSLLTPYSQLLGVPHQWSSFIWLCGPISGMIVQPIVGYCSDRCTSKLGRRRPFILAGAAAVAIAVFLIGFAADIGHAFGDNLTKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDERKTRLANAFFSFFMAVGSVLGYGAGSINSLHKVFPFTQTKACDVFCADLKSCFFFSILLLLVLTGVALFYVQDKPVLREKSRVGEEEDERSAVVACFGEMLGALKGLKKPMLLLMAVTAINWSAWFSYFLYNTDWMGKEVYGGEVGDQAYKEGVQKGALGLLINSVVLGVMSLGVEPIGRAVGGAKNLWGIVNLILAAGLAMTVYISKAAMHERHLNPRYIGHPSTAVQAGALSFFAILGIPLAITFSIPFALASIYSSETGAGQGLSLGVLNLAIVIPQMIVAAISGPWDKLFGGGNLPAFVAGAVAAAVSSIMAFFMLPSTKQSEAAKAALPMGDNAVLARVVLCSSLTFTHVMLLLDIIIEPKTKNRRKRKGRVSKMESPTKSSLQLETATTTNITPILKIISVASVAAGIQFGWALQLSLLTPYVQLLGVPHVWASFIWLCGPISGMVVQPIVGYYSDRCNSRLGRRKPFIITGALSVIIAVFLIGYAADLGHSFGDDITKKTRPRAVAIFVIGFWVLDVANNMLQGPCRAFLGDLSAGDEGKIRMANAFFSFFMAIGNILGYAAGSYENLHKAFPFSNTEACDKFCANLKSCFFISILLLLTLAGLAMFFVEDVPLSEAKKNEDIEGTEDSSRSAGCFGEIVGALKELKKPMWILMLVTAINWIGWFPFFLFNTDWMGKEVYGGNVGDEAYDKGVRAGSLGLMINAIVLAVMSLGVEPASNIMGGAKNLWGIVNFILSGGLLSTIYITKVAEFDRHRAGHYVPPATGVRVGAMTFFAIIGIPLAINFSVPFALASVYSATSGAGQGLSLGVLNLAIVIPQMIVSTVSGQVDAWFGGGNLPAFVMGAIAAAVSGAMAIVMLPSIKKSDAAKASMVVGGGH* 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0014 1102 Gene3D MFS general substrate transporter like domains 620 1083 IPR036259 -
Amo19g0014 1102 Gene3D MFS general substrate transporter like domains 70 550 IPR036259 -
Amo19g0014 1102 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 598 1089 - -
Amo19g0014 1102 CDD MFS_SLC45_SUC 77 517 - -
Amo19g0014 1102 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 58 546 - -
Amo19g0014 1102 SUPERFAMILY MFS general substrate transporter 622 1088 IPR036259 -
Amo19g0014 1102 TIGRFAM GPH_sucrose: sucrose/H+ symporter 73 543 IPR005989 GO:0005887|GO:0008515|GO:0015770
Amo19g0014 1102 TIGRFAM GPH_sucrose: sucrose/H+ symporter 618 1087 IPR005989 GO:0005887|GO:0008515|GO:0015770
Amo19g0014 1102 Pfam MFS/sugar transport protein 89 340 - -
Amo19g0014 1102 Pfam MFS/sugar transport protein 634 789 - -
Amo19g0014 1102 PANTHER SUGAR TRANSPORTER 598 1089 - -
Amo19g0014 1102 SUPERFAMILY MFS general substrate transporter 76 544 IPR036259 -
Amo19g0014 1102 PANTHER SUGAR TRANSPORTER 58 546 - -
Amo19g0014 1102 CDD MFS_SLC45_SUC 622 1080 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0014 Amo-Chr19 142589 154750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0014 58 540 Sucrose Transporter Gene Family AT1G71890 63.618 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0014 K15378 - gmx:100782007 677.937