Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0007 ATGATGAGTTCATCAGCAAGAAAGGAAGAAGAATATGATGACGACGATGCATGCATGTATGCGTTGTTGTTGTCAACTTTTCAAGTGTTCCCTTTCATATTGAATGCTGCTGTTGAACTCAACCTGTTTGACATATTGTCTGAGTTAGCCACCAACGGTGCATACTCATCAGTTTCCGAAATCGCTTCAAAGCTTCCTTCACAGCACCCTCAACTCCACAGCAGGCTGGACAGAATGCTTCGTGTGCTTGCCAGTTTCTCACTTCTCAATTCGAGTGTCGTCGTCGTCGACGGCGACAAGGTTGAGAGGCTTTATAGTCTCTCACATGCTGCTAAATATTTTCTCAAAAATCAGAGTCATAATCTAGCTTTTTTCTCAAATCTCAACTGCCACCCAGCTCTAACAAGGGTTTGGTGA 417 0.4365 MMSSSARKEEEYDDDDACMYALLLSTFQVFPFILNAAVELNLFDILSELATNGAYSSVSEIASKLPSQHPQLHSRLDRMLRVLASFSLLNSSVVVVDGDKVERLYSLSHAAKYFLKNQSHNLAFFSNLNCHPALTRVW* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0007 138 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Amo19g0007 138 Gene3D - 2 114 IPR036388 -
Amo19g0007 138 PANTHER O-METHYLTRANSFERASE 11 138 IPR016461 GO:0008168
Amo19g0007 138 SUPERFAMILY "Winged helix" DNA-binding domain 14 118 IPR036390 -
Amo19g0007 138 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 138 IPR016461 GO:0008168
Amo19g0007 138 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0007 Amo-Chr19 95013 95505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0007 2 138 Monolignol Biosynthesis Gene Families AT5G54160 37.589 1.54e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0007 K13066 - adu:107470446 114.005