Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3499 CCATTACCACCTTATTCGACGGCTCATCATCATAGGGAGGAGGTACTGCCGGCTGCAGAGGAGGAGCTCGTGCCAACTGCAGGGGAGGAGGCAGCACCAACGAAGACAGGATATCATTGGACCCAAGATGAACATAGGTTATTTCTTAGAGGGTACCAAGAAGAAGGTAAACACTGGAAAAGAATTTCAGAATATTATGTAAAAACAAAAACTTCTAGTCAAATTTCCAGTCATGCTCAGAAACATTTTTTACATCAAGAAGAATCGGCTAAAGGAAAAAAGCTAAGAAAAAAAATTGTGTCCTATTCCGAGGTTTTTAATGGATGGAGGAGGATTTGCTTAAAGGAGGAAGAACATTTCTCTGGCCTTGATGGCAATGCCGAAGAGGACAGTGAACTAGATTTTAAACGAACATACAATTAA 423 0.409 PLPPYSTAHHHREEVLPAAEEELVPTAGEEAAPTKTGYHWTQDEHRLFLRGYQEEGKHWKRISEYYVKTKTSSQISSHAQKHFLHQEESAKGKKLRKKIVSYSEVFNGWRRICLKEEEHFSGLDGNAEEDSELDFKRTYN* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3499 140 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 87 IPR017930 -
Amo18g3499 140 Gene3D - 39 89 - -
Amo18g3499 140 SUPERFAMILY Homeodomain-like 33 88 IPR009057 -
Amo18g3499 140 PANTHER TRANSCRIPTION FACTOR KUA1 31 100 - -
Amo18g3499 140 CDD SANT 40 83 IPR001005 -
Amo18g3499 140 SMART sant 36 85 IPR001005 -
Amo18g3499 140 PANTHER TRANSCRIPTION FACTOR SRM1 31 100 - -
Amo18g3499 140 Pfam Myb-like DNA-binding domain 40 82 IPR001005 -
Amo18g3499 140 ProSiteProfiles Myb-like domain profile. 40 83 IPR001005 -
Amo18g3499 140 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 86 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3499 Amo-Chr18 138534079 138535547 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo18g3499 Myb_DNA-binding 2.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3499 - - adu:107463192 182.185