Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3466 ATGGAGAATGCAGAGGAAGAAATGTCAACAGTTATGGAGAAAGAGAATGGAAAGGAGGAAGAAGGAGGAGAAGAGGTGTCACCAATTGAGCAAGTGAGACTGACAGTTAGCAACAGTGATGACCCAAGCCAACCAGTTTGGACATTCCGAATGTGGTTCCTTGGCCTCTTTTCTTGCTGCCTCCTATCATTCCTCAACCAGTTCTTTTCTTACCGGACGGAGCCACTCATCATATCGCAGATCACCATCCAGGTAGCCACCCTCCCCATCGGTCAATTCATGGCCGCGGTTCTCCCCACCACCGAGTTCGGCATTGGCTCCTGGAAGTTCTCCTTCAACCCTGGACCGTTCAACATGAAGGAGCATGTCCTCATTACCATCTTTGCCAACGCTGGTAGCGCCTTCGGCTCCGGCTCACCCTATGCCGTCGCAATTGTCACCATCATCAAAGTGTTAGGATATGGCTGGGCAGGGTTGCTAAGGAAATACGTGGTAGAGCCCGCTCAAATGTGGTGGCCTAGTACCCTCGTCCAGGTTTCTCTTTTCCGAGCTTTGCATGAGAAAGACGATCGCAGAGTTTCACGGGCAAAGTTCTTCTTTATAGCAATGGTGTGCAGCTTTGCATGGTACATTGTCCCCGGCTACCTGTTCTCCACACTCTCAAGCATTTCATGGATGTGCTGGGCATTTCCCAAGTCGATCACCGCCCAGCAGATTGGCTCAGGGATGAATGGCTTAGGACTTGGAGTCTTTACTCTTGACTGGACTGTCATCGCCTCCTTCTTGTACAGTCCTCTCATCTCTCCCTTCTTCGCCATTGTCAACGTCTTCATCGGCTATTCGCTCATTGTCTACGGTGTCATCCCTATTGCTTACTGGGCCTTCAATGTCTACAATGCACACAACTTCCCCATCTTCTCCTCTGACTTGTTCACCACTCAAGGCCAAGAATATGACATACGTGCCATTGTCAATGACAAGTTTCAGATCGATTATGAAAAGTATTACAAGCAAGGTCCTATTCAATTAAGTGTCTTTTTTTCTCTTACTTATGGATTTGGATTTGCTACTATAGCCGCCACCCTTACTCATGTCGTTTGCTTCTATGGAAGTGAGATTATGGAGCAATATCGTGCTTCTTCCAAGGGTAAAGAAGATATCCACACAAGACTGATGAAAAGATACAAAGACATACCTTCATGGTGGTTCTATGTGTTGCTGGCTACACCAGGGTTGAATATTATTACTGAGTATATATTTGGACTTATTTACACTGGAAGACCAATAGCAAATGTGTGTTTCAAAACCTACGGTTATATTAGCATGGCTCAGGCTGTCTCTTTCCTTGCTGATTTCAAGCTTGGCCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATTGGTACAATTCTTGCTGGAACCATCAACATTGGTGTAGCATGGTGGTTACTGACTTCAGTGGACGGTATATGTCATCCTGAAAAGCTTCCCCTCGGCAGTCCATGGACATGTCCTGGTGACCGTGTTTTCTTCGATGCATCGGTTATCTGGGGTTTAGTTGGACCTAAGAAGATCTTTGGTTCCAAATCAGACTACCATGCACTGAATTGGTTTTTCTTTGGAGGTGCAATGGGCCCTATAATTCTTTGGCTATTGTATAAGGTGTTCCCCAAGTATTCATGGATTCCCTTGATTAACCTTCCAGTCCTCTTGGGATCAACTGCGGTGATGCCACCCGCAACAGCAGTGAACTTCAATTCCTGGATTGTTATTGGAACAATCTTCAACTACTTCATCTTCCGCTATAGAAAGAAATGGTGGCAGAGATACAACTATGTCCTGTCAGCAGCACTTGATGCTGGAGTTGCCTTCATGGCTGTGCTTCTTTACTTTGCATTAGGCCTGGAGAACAAGAGTATTTCATGGTGGGGAACACAGGGTGAGCATTGTCCACTGGCAACTTGCCCAACAGCTAAGGGCATAGTGGTGGAGGGTTGCCCTGTACACTGA 2022 0.4634 MENAEEEMSTVMEKENGKEEEGGEEVSPIEQVRLTVSNSDDPSQPVWTFRMWFLGLFSCCLLSFLNQFFSYRTEPLIISQITIQVATLPIGQFMAAVLPTTEFGIGSWKFSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVAIVTIIKVLGYGWAGLLRKYVVEPAQMWWPSTLVQVSLFRALHEKDDRRVSRAKFFFIAMVCSFAWYIVPGYLFSTLSSISWMCWAFPKSITAQQIGSGMNGLGLGVFTLDWTVIASFLYSPLISPFFAIVNVFIGYSLIVYGVIPIAYWAFNVYNAHNFPIFSSDLFTTQGQEYDIRAIVNDKFQIDYEKYYKQGPIQLSVFFSLTYGFGFATIAATLTHVVCFYGSEIMEQYRASSKGKEDIHTRLMKRYKDIPSWWFYVLLATPGLNIITEYIFGLIYTGRPIANVCFKTYGYISMAQAVSFLADFKLGHYMKIPPRSMFLVQFIGTILAGTINIGVAWWLLTSVDGICHPEKLPLGSPWTCPGDRVFFDASVIWGLVGPKKIFGSKSDYHALNWFFFGGAMGPIILWLLYKVFPKYSWIPLINLPVLLGSTAVMPPATAVNFNSWIVIGTIFNYFIFRYRKKWWQRYNYVLSAALDAGVAFMAVLLYFALGLENKSISWWGTQGEHCPLATCPTAKGIVVEGCPVH* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3466 673 PANTHER ISP4 LIKE PROTEIN 409 672 IPR004648 GO:0055085
Amo18g3466 673 PANTHER ISP4 LIKE PROTEIN 20 408 IPR004648 GO:0055085
Amo18g3466 673 PANTHER PEROXIDASE 409 672 - -
Amo18g3466 673 Coils Coil 1 21 - -
Amo18g3466 673 MobiDBLite consensus disorder prediction 7 27 - -
Amo18g3466 673 Pfam OPT oligopeptide transporter protein 410 636 IPR004813 GO:0035673
Amo18g3466 673 Pfam OPT oligopeptide transporter protein 47 408 IPR004813 GO:0035673
Amo18g3466 673 MobiDBLite consensus disorder prediction 1 27 - -
Amo18g3466 673 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 31 407 IPR004813 GO:0035673
Amo18g3466 673 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 410 639 IPR004813 GO:0035673
Amo18g3466 673 PANTHER PEROXIDASE 20 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3466 Amo-Chr18 137778863 137783249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3466 19 673 Organic Solute Cotransporters AT5G64410 70.759 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3466 - - gmx:100819886 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2267 10 79535215 79539920 Amo18g3466 18 137778863 137783249 hybridization
Amo16g3764 16 149044534 149049629 Amo18g3466 18 137778863 137783249 PCT
Amo18g3466 18 137778863 137783249 Amo16g3764 16 149044534 149049629 PCT