Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3455 ATGTTCGCTGAAGAGAATGGTCTCAAGGGTGACCCAAGGCTTCAAGCCATTTCTCAAGCCATCAGAGTCGTTCCTCACTTCCCCAAGCAAGGAATAATGTTTCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAGGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAGTGGAAGCTAGGGGATTCTTGTTTGGTCCCTCAATTGCATTGGGGATTGGTGCAAAATTTGTTCCTTTACGCAAACCAAGGAAGCTGCCAGGCGAAGTAATATCAGAAAAGTATTCTCTAGAATACGGAACTGATTGTTTGGAGTTACATGTTGGTGCTGTCCAGCCGGGTGAACGAGCCATAGTTATCGATGACTTGGTGGCCACAGGTGGAACTCTCTCGGCAGCAATAAGACTTCTAGAACGTTCTGGTGCTGAAGTAGTGGAATGTGCTTGTGTGATCGGTGTGCCGGATGTTAAGGGACACTGTAGGCTTATCGGAAAACCACTCTACGTCCTCGTTGAGCCACGTGAAGTAGATAAATGTTCCAGATGTGAAGTTGATTCTTCCTTTGGCTGA 603 0.466 MFAEENGLKGDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGVEARGFLFGPSIALGIGAKFVPLRKPRKLPGEVISEKYSLEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAAIRLLERSGAEVVECACVIGVPDVKGHCRLIGKPLYVLVEPREVDKCSRCEVDSSFG* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3455 200 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 191 - -
Amo18g3455 200 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Amo18g3455 200 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 191 - -
Amo18g3455 200 CDD PRTases_typeI 51 183 IPR000836 -
Amo18g3455 200 Gene3D - 6 184 IPR029057 -
Amo18g3455 200 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Amo18g3455 200 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Amo18g3455 200 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3455 Amo-Chr18 137619470 137623842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3455 11 183 PRT Gene Family AT1G27450 72.254 5.96e-91 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3455 K00759 - gmx:100499904 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3455 18 137619470 137623842 Amo18g3455 18 137619470 137623842 ECH
Amo16g3652 16 147311194 147315240 Amo18g3455 18 137619470 137623842 ECH
Amo08g2133 08 34185663 34189244 Amo18g3455 18 137619470 137623842 hybridization
Amo16g3652 16 147311194 147315240 Amo18g3455 18 137619470 137623842 PCT
Amo18g3455 18 137619470 137623842 Amo16g3652 16 147311194 147315240 PCT