Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo18g3400 | ATGGAAGACCAGCCACCAACAAAGCCATCACCAACAACGAAGACCTACAAGCTCACTGCCACTTCAATCTCCTACACTAAATCCACCACCACCACCATCACCACCACCACCTTTGCTGTACCACTCTTACTCTTCAAACACTGCACAACAACCCCACCAACCTACATCCTCAAAGAGGTCTCCTTAACTGCATACCCTTCTGAAATCCTTGCCATTGTTGGCCCAAGTGGTGCAGGAAAATCCACCCTCTTAGACATTCTCTCTGCTAGAACACTTCCATCACATGGAACTCTTGAACTCAACAATTCCCCTCTTATTCCTTCCACATTCAGAAAACTCTCAGCATATGTTCCACAACATGATGCATGCCTCCCTTTGCTCACAGTGTCCGAGACTTTTGCATTTTCAGCACACCTCCTCAAGCCTAAAACCTCTGACATTGCAGCCATAGTTTCTTCTCTTCTCAGTGAACTGAGGTTAACTCATTTGGCMMACACAAGGCTCTCTCATGGTCTATCAGGTGGAGAACATAGAAGAATCTCCATAGGCCTTAGTCTTCTCCATGATCCTGCAGTGTTGCTCCTTGATGAACCAACTTCAGGCCTTGACAGCACCTCTGCATTCAAGGTCATGCAGATTCTCAAATCCATTTGCGTTTCACGTCACAGGACAATTGTTCTCTCCATTCACCAACCAAGCTTCAAGATCCTCTCTTGCATTGATAGGATCTTGTTGCTRTCCAAGGGTACTGTGGTCCACCACGGAAGCCTTGCATCACTYCAAGCATTCTTACACTCRAATGGCTTTACCGTGCCYCATCAACTCAATGCATTGGAATATGCAATGGAAATATTAAGTCAATTGAACGAGCTTAAGCCTATTACTCCACCAAGCATTCCTGAATCACCTGAAAGTTCATCAGCTGCAAGTTCCATATCTGATAACAATGGACATAGATCCAAAGAGATAATAAGGTACAAGAGCTCCAGAATCCATGAAATATGCACTCTATATGGCAGGTTTTGGAAGATAATATACAGAACAAGGCAACTCCTTTTAACAAACACCTTAGAGGCACTTCTTGTAGGGCTTGTTTTGGGAACAATTTACATCAACATAGGGTTTGATAAGGAAGGAATTGAGAAAAGGTTTGAAACATCAAGCGGGGTTTATAGGCTCTCATCATATCTCATTGCAAACACACTTGTTTTCTTGCCATACTTGCTTGTAGTTGCAATCATATACTCCATCCCAGTCTACTTCTTAGTTGGTTTATGTGCTTCTTGGATTTCTTTTGCTTATTTTGTTYTGGTCATTTGGGTAATTGTTCTCATGGCAAACTCCTTTGTGCTCTTCTTGAGTTCCCTGGCACCTAACTACATTGCTGGCACATCACTATTAACAGTGCTTCTTGCAGCATTTTTTCTGTTCTCTGGGTACTTCATCTCAAAGGAGAGTTTACCAAAGTACTGGCTTTTCATGCATTTTTTGTCCATGTACAAGTATGCACTTGATGCATTACTCATCAACGAGTACTCTTGTTTGGCCACAAGGTGTTTGATATGGTACCAAGAGAATCAAGTTTGTATGGTAACTGGGGGTGATGTGTTGCAGAAGAGGGGGCTCCAAGAAAGTCAAAAATGGACCAATGTTTACTTCTTGATTGGGTTCTTTGTGTTGTACCGTGTGCTTTGCTTGTTGGTTTTGATTAGAAGRGTTTCAAGGTCCAAAACTTGA | 1737 | 0.4243 | MEDQPPTKPSPTTKTYKLTATSISYTKSTTTTITTTTFAVPLLLFKHCTTTPPTYILKEVSLTAYPSEILAIVGPSGAGKSTLLDILSARTLPSHGTLELNNSPLIPSTFRKLSAYVPQHDACLPLLTVSETFAFSAHLLKPKTSDIAAIVSSLLSELRLTHLAXTRLSHGLSGGEHRRISIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSICVSRHRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQAFLHSNGFTVPHQLNALEYAMEILSQLNELKPITPPSIPESPESSSAASSISDNNGHRSKEIIRYKSSRIHEICTLYGRFWKIIYRTRQLLLTNTLEALLVGLVLGTIYINIGFDKEGIEKRFETSSGVYRLSSYLIANTLVFLPYLLVVAIIYSIPVYFLVGLCASWISFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFLSMYKYALDALLINEYSCLATRCLIWYQENQVCMVTGGDVLQKRGLQESQKWTNVYFLIGFFVLYRVLCLLVLIRRVSRSKT* | 579 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo18g3400 | 578 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 385 | 573 | - | - | |
Amo18g3400 | 578 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 8 | 385 | 573 | - | - | |
Amo18g3400 | 578 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 38 | 273 | IPR003439 | GO:0005524 | |
Amo18g3400 | 578 | Pfam | ABC-2 type transporter | 385 | 512 | IPR013525 | GO:0016020|GO:0140359 | |
Amo18g3400 | 578 | Gene3D | - | 44 | 291 | IPR027417 | - | |
Amo18g3400 | 578 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 51 | 264 | IPR027417 | - | |
Amo18g3400 | 578 | SMART | AAA_5 | 66 | 250 | IPR003593 | - | |
Amo18g3400 | 578 | Pfam | ABC-2 type transporter | 230 | 290 | IPR043926 | GO:0140359 | |
Amo18g3400 | 578 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 5 | 384 | - | - | |
Amo18g3400 | 578 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 8 | 5 | 384 | - | - | |
Amo18g3400 | 578 | MobiDBLite | consensus disorder prediction | 301 | 316 | - | - | |
Amo18g3400 | 578 | MobiDBLite | consensus disorder prediction | 295 | 316 | - | - | |
Amo18g3400 | 578 | Pfam | ABC transporter | 57 | 200 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo18g3400 | Amo-Chr18 | 136247668 | 136249494 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo18g3400 | 50 | 256 | Calmodulin-binding Proteins | AT2G36910 | 30.594 | 1.28e-16 | 82.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo18g3400 | K05681 | - | gmx:100790712 | 836.254 |