Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3394 ATGGAGGAAATTGAAGGGTTCAATTGTGGTGAAAGTAAGAGCCCCATTGATGGTCGACCTCCGAATCCACCTTCTTCTGCTGCCTCTGCCTTTCGCCAATGCCATCACAACAAGAAACCCCTTGTTCGCCATCCTTCTCTTATGATGACAAAACTTTCTGATGTATCCGTTGAACCGGAGCGTGCCACTGAAGATTGTCAATCTGATTTCCTTCCAAAGCTTCGTTCTGGAGGATGTGGTAATATGGGGTTCCGGTCAAGTATGGAAGATGTTTATGTTTGCGTTGACAATTTTATGCAAGAGAATGCACTCAAGAACCATATAGACGGACCTAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGCCACCATTTACCAAAGTTCATTGTTCAAGATGATGATTTCCCAAGTGATATTGAGAGGATAATTGCTTCAGCATTTCTGCAAACTGACAATGCCTTCGCAGAAGCCTGCTCTGTGGATGCTACCCTTGCATCTGGCACTACGGCGTTGGCTGCTCTTGTTATTGGAAGGCAACTGGTGGTAGCAAATGCTGGAGATTGCCGAGCTGTGCTGTGTCGGCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCTGTGTGCATGAAAGAGAAGAAGCGTATTGAGGCATCTGGGGGGTATGTCTATGATGGATATCTTAATGGACAACTCAATGTTGCTCGTGCTATTGGCGATTGGCACGTGGAAGGGATGAAAAGCCGAGGCGGGGGACCACTCAGCGCAGAACCTGAGTTTATGAGTACAAAACTCACCGCCGAGGATGAATTCCTCATAATTGGTTGCGACGGGATTTGGGATGTATTTAGGAGCCAGAATGCAGTAGACTTTGCTCGCCGCAGGCTTCAGGAACATAATGACCCCACCATGTGTAGCAAGGATTTGGTTGATGAGGCTTTGAAAAGAAAGAGTGGAGACAATTTATCTGCTGTTGTAATTTGCTTCCAGCAACAACCTCCGCCTAACTTGGTGGTGCCGCGCTCGAGAGTGCACAGGAGCTTCTCCGCCGAAGGCTTGAGGGAGTTGCAAAGCTTCCTGGATAACTTAGGTAATTGA 1125 0.4684 MEEIEGFNCGESKSPIDGRPPNPPSSAASAFRQCHHNKKPLVRHPSLMMTKLSDVSVEPERATEDCQSDFLPKLRSGGCGNMGFRSSMEDVYVCVDNFMQENALKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVQDDDFPSDIERIIASAFLQTDNAFAEACSVDATLASGTTALAALVIGRQLVVANAGDCRAVLCRRGKAIEMSRDHKPVCMKEKKRIEASGGYVYDGYLNGQLNVARAIGDWHVEGMKSRGGGPLSAEPEFMSTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVVPRSRVHRSFSAEGLRELQSFLDNLGN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3394 374 MobiDBLite consensus disorder prediction 1 30 - -
Amo18g3394 374 ProSiteProfiles PPM-type phosphatase domain profile. 75 338 IPR001932 -
Amo18g3394 374 SMART PP2C_4 65 336 IPR001932 -
Amo18g3394 374 Gene3D - 52 342 IPR036457 -
Amo18g3394 374 Pfam Protein phosphatase 2C 76 330 IPR001932 -
Amo18g3394 374 SUPERFAMILY PP2C-like 69 340 IPR036457 -
Amo18g3394 374 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Amo18g3394 374 CDD PP2Cc 75 338 IPR001932 -
Amo18g3394 374 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 45 360 - -
Amo18g3394 374 PANTHER PROTEIN PHOSPHATASE 2C 45 360 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3394 Amo-Chr18 136113734 136117055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3394 1 374 PP2C-type Phosphatase Gene Family AT2G25620 66.327 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3394 K14803 - gmx:100815725 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2054 08 33235420 33238758 Amo18g3394 18 136113734 136117055 hybridization