Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3378 GTTTCTCACACTCCTCAAGCTTCCACCAGAGGCTCACCATTTGTTGTTGGCGGTGGATTCCATCACAGTCGCGCCCCCATCCAGCCCACAATCCCCTTGTGCATTTTGTTCTGCGTCGCTCCTTTCCCAGCGCTGTCGTGGTCTCCATCCAGCATCTTCGTCATCTCTTCGGTTTCGCTGTTGCTGCTACCGGTTGCATTGCTGGCGGTCCTGCTTGATGTTCTTGTTGCTGTCGGAGATATCATTCCGGCCAATGCTTGTCTTCTCGAGGACAATTCTCTAAGTGTTGATCAGTCTGCTCTAACAGGAGAATCTCTTCTAGTGACTAAGAACTCCACTGATGAAGTATTTTCTGGATCAATAATCAAGAAGGGTGAGATAGAAGCAGTTGTGATAGTCACTGGTGTGCACACCTTCTTTGGTAAAGCGGCTCACTTGGTGGACAGCGCTAACCAAGTTGGACACTTCTAG 471 0.4968 VSHTPQASTRGSPFVVGGGFHHSRAPIQPTIPLCILFCVAPFPALSWSPSSIFVISSVSLLLLPVALLAVLLDVLVAVGDIIPANACLLEDNSLSVDQSALTGESLLVTKNSTDEVFSGSIIKKGEIEAVVIVTGVHTFFGKAAHLVDSANQVGHF* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3378 156 Pfam E1-E2 ATPase 74 152 - -
Amo18g3378 156 Gene3D - 135 149 - -
Amo18g3378 156 Gene3D - 74 134 - -
Amo18g3378 156 PANTHER PLASMA MEMBRANE ATPASE 75 156 - -
Amo18g3378 156 PANTHER CALCIUM-TRANSPORTING ATPASE 75 156 - -
Amo18g3378 156 SUPERFAMILY Calcium ATPase, transduction domain A 74 147 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3378 Amo-Chr18 135769856 135770937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3378 74 156 Primary Pumps ATPases AT4G30190 75.904 5.02e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3378 K01535 - gmx:547525 130.183