Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3377 ATGACGACTATTGAGAAAATAGCTAGGATGGATGTCCTCTGCAGTAATAAAAGTGTAACCTTGACATTGAATAAGCTCAATATTGATAGAAACTTGATTGAGGTATTTGCTAAAGATGTTGAGAAGGAGTATGTTATCCTTCTTGCTGCAAGGACCTCTAGGACTAAAAATCAGGATGCTATAGATGCTGCTATATATGATTAA 204 0.3529 MTTIEKIARMDVLCSNKSVTLTLNKLNIDRNLIEVFAKDVEKEYVILLAARTSRTKNQDAIDAAIYD* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3377 67 Gene3D - 26 66 IPR023299 GO:0000166
Amo18g3377 67 Gene3D - 1 10 - -
Amo18g3377 67 Gene3D - 11 25 IPR023214 -
Amo18g3377 67 PANTHER PLASMA MEMBRANE ATPASE 1 65 - -
Amo18g3377 67 PANTHER CALCIUM-TRANSPORTING ATPASE 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3377 Amo-Chr18 135769606 135769809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3377 1 67 Primary Pumps ATPases AT2G07560 68.657 3.05e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3377 K01535 - gmx:100794372 103.605