Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3322 ATGATTCTAGCAATGGTTGAAAGAAGATATTGTGAGAAGCACAAACGGAATATCTTGAGAATTGATATGCCTCTTACCATTCGGCATAATGCTTATGATCAGGATCCTTATGCAAAGGAATTTGGAATAAAAAGTGAAAAGCTAGCTTCTGTTGAAGCAAGAATTCTTCCTGCCCCTTGGCTTAAATATCATGGAAGTGGGGAAGAAAAGAGTTGTTTACCTCAAGAGTTTAATCCGGAACCTGTTATCCCCATATATACAATGCTCAATAGAAAGGGATTGGAGCTTTTGTTGGCAATATTACCTGACAACAATGGTTCTCTCTATGGTAAATCACATTGTTGA 345 0.3739 MILAMVERRYCEKHKRNILRIDMPLTIRHNAYDQDPYAKEFGIKSEKLASVEARILPAPWLKYHGSGEEKSCLPQEFNPEPVIPIYTMLNRKGLELLLAILPDNNGSLYGKSHC* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3322 114 PANTHER PROTEIN ARGONAUTE 10 16 75 - -
Amo18g3322 114 Pfam Argonaute linker 2 domain 27 63 IPR032472 -
Amo18g3322 114 PANTHER PROTEIN ARGONAUTE 10 76 111 - -
Amo18g3322 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 76 111 - -
Amo18g3322 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 16 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3322 Amo-Chr18 134610020 134611243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3322 22 110 Eukaryotic Initiation Factors Gene Family AT5G43810 46.541 1.84e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3322 K11593 - csin:114315693 120.168