Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3289 ATGGAAGCGGGGACGGTGGCACGACAACGGTGCAGGAACGACAACGGTGCAAGCACAATGACGGCGACAGTACATGCGGAGGGGTTGCGTGCGATTGACGGGTCTAGATTGTCCCAACTATATGAATGTCATTTTTCTGTGGAAGATTATGATGCATTTTATACCAATTATGCAAAGAGAAATACAAATCCAACTTGTGATAAAAACTATAAAGCTAGGATAATTGTGAAGAGGGATAAGAAGCTGGAGTATATGTTAACCTCTGTTAACACTCAGCATAACCATGATGTTAGTCTTAGCATGGCAAAGTCTCTGAAGAAGAACAGGAAACTAAAACGTGACAAGTGGGTCTCTGTTTTTCTCAACAACAAGTTTTCGATAGGCATGAGTTGCACTCAAAGGAGTGAAAGCATGCATGCATTTATGAACGGCTACTTAACCTCAAAGATCCAAAAGGGATATAAATTGGATAATGCTACCTTCAATATCATTATCCATTGTGTTACTGTTTCTCCAATTGAAAACCAATTTCAAACAAAATATACTCATGGCATGTTTAGTGAACTTCAAAAGAAGTTTAGGCCAATGATTAATTACATTATAACAAAAGATCACGAGGAGGGTTATATTTTCACTTACAAGATTATAAAAGAGATTGAGCATAATGACAAGATGTTTGATTTTATGTATGAGGTGCTATTTGATTCCTCAACTTCAAATGTTTGTTGCCAATGCCATCTTTTTGAGCCAAAGAAAATCTTATGTCGCCATAGTCTTTTTGTCCTTGGTCTTGAAAGAGTGAAGAAATTGCCAAACAAATACATCCATGATCGCATAAAGTGTAGCTATGATCATTTAGAGCCCACAAAGAAACAATATGATGACATGTGCAAGCAATTTTATAACATTGCCGAAGTCAACAAAATCGTACATCGTGTACTTAACTTGAATTGGGTTATGTTGTTGGAACCAAATGCCTCTATAATGAATAATATATATGATCAACATTCAAATGAGGTAGATGAAAATGCAAATGGTTTGGAGATCCACAAGCTCCAACAAGTATCACAAAAATGTCGAAAGCAAAAGAAGAGGCTTCAATCTACTATAGAAACAATTGTTAAACAAGATAGGAACAAGAAGCTTCAAATTGCTAACACCAAGAAACATAGCAAGAATGTGAAAGAGAAAAAAGAGACAAGTTCAATATTTGATTGA 1218 0.3604 MEAGTVARQRCRNDNGASTMTATVHAEGLRAIDGSRLSQLYECHFSVEDYDAFYTNYAKRNTNPTCDKNYKARIIVKRDKKLEYMLTSVNTQHNHDVSLSMAKSLKKNRKLKRDKWVSVFLNNKFSIGMSCTQRSESMHAFMNGYLTSKIQKGYKLDNATFNIIIHCVTVSPIENQFQTKYTHGMFSELQKKFRPMINYIITKDHEEGYIFTYKIIKEIEHNDKMFDFMYEVLFDSSTSNVCCQCHLFEPKKILCRHSLFVLGLERVKKLPNKYIHDRIKCSYDHLEPTKKQYDDMCKQFYNIAEVNKIVHRVLNLNWVMLLEPNASIMNNIYDQHSNEVDENANGLEIHKLQQVSQKCRKQKKRLQSTIETIVKQDRNKKLQIANTKKHSKNVKEKKETSSIFD* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3289 405 ProSiteProfiles Zinc finger SWIM-type profile. 230 266 IPR007527 GO:0008270
Amo18g3289 405 Coils Coil 349 369 - -
Amo18g3289 405 PANTHER OS03G0843700 PROTEIN 112 367 - -
Amo18g3289 405 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 112 367 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3289 Amo-Chr18 134121292 134124784 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g3289 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3289 - - aip:107611508 379.022